Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.16□□□□□ -0.78
Clrn1Q8K445 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Mir8091-201ENSMUST00000183602 139 ntBASIC10.16□□□□□ -0.78
Clrn1Q8K445 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.16□□□□□ -0.78
Clrn1Q8K445 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Gm38321-201ENSMUST00000195053 235 ntBASIC10.16□□□□□ -0.78
Clrn1Q8K445 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Gm42859-201ENSMUST00000199572 193 ntBASIC10.16□□□□□ -0.78
Clrn1Q8K445 Gm8255-201ENSMUST00000218693 305 ntBASIC10.16□□□□□ -0.78
Clrn1Q8K445 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Gm7525-201ENSMUST00000219425 454 ntBASIC10.16□□□□□ -0.78
Clrn1Q8K445 Gm29787-201ENSMUST00000222129 849 ntBASIC10.16□□□□□ -0.78
Clrn1Q8K445 AC132446.1-201ENSMUST00000222655 226 ntBASIC10.16□□□□□ -0.78
Clrn1Q8K445 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.16□□□□□ -0.78
Clrn1Q8K445 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.16□□□□□ -0.78
Clrn1Q8K445 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.16□□□□□ -0.78
Clrn1Q8K445 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Clrn1Q8K445 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm15264-201ENSMUST00000118050 502 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.15□□□□□ -0.78
Clrn1Q8K445 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm5529-201ENSMUST00000165691 891 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm18776-201ENSMUST00000188833 654 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm7047-201ENSMUST00000196224 1063 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm19091-201ENSMUST00000208120 978 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm7082-201ENSMUST00000209880 969 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.15□□□□□ -0.78
Clrn1Q8K445 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Clrn1Q8K445 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.15□□□□□ -0.78
Clrn1Q8K445 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Clrn1Q8K445 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Clrn1Q8K445 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Clrn1Q8K445 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.79
Clrn1Q8K445 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.15□□□□□ -0.79
Clrn1Q8K445 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.15□□□□□ -0.79
Clrn1Q8K445 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.15□□□□□ -0.79
Clrn1Q8K445 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Clrn1Q8K445 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.79
Clrn1Q8K445 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Clrn1Q8K445 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.15□□□□□ -0.79
Clrn1Q8K445 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.15□□□□□ -0.79
Clrn1Q8K445 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Clrn1Q8K445 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.15□□□□□ -0.79
Clrn1Q8K445 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.15□□□□□ -0.79
Clrn1Q8K445 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms