Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccdc28bQ8CEG5 BC005624-201ENSMUST00000028205 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccdc28bQ8CEG5 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccdc28bQ8CEG5 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC10.63□□□□□ -0.71
Ccdc28bQ8CEG5 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ccdc28bQ8CEG5 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ccdc28bQ8CEG5 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ccdc28bQ8CEG5 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Eno4-202ENSMUST00000200910 2567 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Eno4-201ENSMUST00000054280 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gm22711-201ENSMUST00000116890 133 ntBASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gm15595-201ENSMUST00000120840 961 ntBASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gm9089-201ENSMUST00000122027 526 ntBASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gm25492-201ENSMUST00000157383 129 ntBASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gm18730-201ENSMUST00000218038 343 ntBASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Tuba4a-202ENSMUST00000186213 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccdc28bQ8CEG5 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Gfra2-203ENSMUST00000227697 1323 ntBASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Gm42979-201ENSMUST00000196287 2228 ntBASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Gm14193-201ENSMUST00000105067 153 ntBASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Gm4917-201ENSMUST00000121452 650 ntBASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Gm43822-201ENSMUST00000200285 476 ntBASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Olfr584-201ENSMUST00000098210 964 ntBASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Slc7a9-202ENSMUST00000118383 1869 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc28bQ8CEG5 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc28bQ8CEG5 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc28bQ8CEG5 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Ccdc28bQ8CEG5 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc28bQ8CEG5 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc28bQ8CEG5 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc28bQ8CEG5 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc28bQ8CEG5 Plcd4-201ENSMUST00000027362 2977 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms