Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gm23769-201ENSMUST00000104441 121 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gm12418-201ENSMUST00000118116 942 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gm26368-201ENSMUST00000157826 118 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gm22876-201ENSMUST00000175450 298 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gm5808-201ENSMUST00000178090 357 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gm5274-201ENSMUST00000182641 1003 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gm8384-201ENSMUST00000190905 704 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 AC169511.1-201ENSMUST00000227639 995 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sh3rf2Q8BZT2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm42521-201ENSMUST00000199190 2040 ntBASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm26313-201ENSMUST00000157770 308 ntBASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm29543-201ENSMUST00000188138 967 ntBASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm7539-201ENSMUST00000189789 630 ntBASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm37207-201ENSMUST00000194284 296 ntBASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms