Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp54Q8BL06 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Usp54Q8BL06 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp54Q8BL06 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp54Q8BL06 Gm2492-201ENSMUST00000221355 1394 ntBASIC15.04■□□□□ -0
Usp54Q8BL06 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Anapc15-203ENSMUST00000098237 1328 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Usp54Q8BL06 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 4933424L21Rik-201ENSMUST00000142486 1186 ntTSL 5 BASIC15.03■□□□□ -0
Usp54Q8BL06 Mir6981-201ENSMUST00000184293 115 ntBASIC15.03■□□□□ -0
Usp54Q8BL06 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC15.03■□□□□ -0
Usp54Q8BL06 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Usp54Q8BL06 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC15.03■□□□□ -0
Usp54Q8BL06 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC15.03■□□□□ -0
Usp54Q8BL06 AC124772.3-201ENSMUST00000222535 575 ntBASIC15.03■□□□□ -0
Usp54Q8BL06 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC15.03■□□□□ -0
Usp54Q8BL06 AC154643.1-201ENSMUST00000225643 625 ntBASIC15.03■□□□□ -0
Usp54Q8BL06 AC154683.1-201ENSMUST00000228409 1284 ntBASIC15.03■□□□□ -0
Usp54Q8BL06 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC15.03■□□□□ -0
Usp54Q8BL06 n-R5s25-201ENSMUST00000082923 119 ntBASIC15.03■□□□□ -0
Usp54Q8BL06 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Usp54Q8BL06 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Usp54Q8BL06 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Usp54Q8BL06 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Usp54Q8BL06 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Usp54Q8BL06 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Usp54Q8BL06 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Gm17230-201ENSMUST00000171194 3942 ntBASIC15.03■□□□□ -0
Usp54Q8BL06 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp54Q8BL06 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC15.02■□□□□ -0
Usp54Q8BL06 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
Usp54Q8BL06 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC15.02■□□□□ -0
Usp54Q8BL06 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Gm5910-201ENSMUST00000211819 1746 ntBASIC15.02■□□□□ -0
Usp54Q8BL06 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC15.02■□□□□ -0
Usp54Q8BL06 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Gm38220-201ENSMUST00000195774 1447 ntBASIC15.02■□□□□ -0
Usp54Q8BL06 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC15.02■□□□□ -0
Usp54Q8BL06 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Usp54Q8BL06 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Usp54Q8BL06 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Usp54Q8BL06 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.02□□□□□ -0.01
Usp54Q8BL06 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Usp54Q8BL06 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Usp54Q8BL06 Gm15602-201ENSMUST00000116162 465 ntBASIC15.02□□□□□ -0.01
Usp54Q8BL06 n-R5s154-201ENSMUST00000122513 108 ntBASIC15.02□□□□□ -0.01
Usp54Q8BL06 Gm7847-201ENSMUST00000151645 777 ntBASIC15.02□□□□□ -0.01
Usp54Q8BL06 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Usp54Q8BL06 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC15.02□□□□□ -0.01
Usp54Q8BL06 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Usp54Q8BL06 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC15.02□□□□□ -0.01
Usp54Q8BL06 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC15.02□□□□□ -0.01
Usp54Q8BL06 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC15.02□□□□□ -0.01
Usp54Q8BL06 Gm18621-201ENSMUST00000222677 679 ntBASIC15.02□□□□□ -0.01
Usp54Q8BL06 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Usp54Q8BL06 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Usp54Q8BL06 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Usp54Q8BL06 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Gm38309-201ENSMUST00000192063 1518 ntBASIC15.01□□□□□ -0.01
Usp54Q8BL06 Ribc1-201ENSMUST00000026288 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Gm15604-201ENSMUST00000118350 1456 ntBASIC15.01□□□□□ -0.01
Usp54Q8BL06 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC15.01□□□□□ -0.01
Usp54Q8BL06 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms