Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Mir6546-201ENSMUST00000184460 62 ntBASIC11.85□□□□□ -0.51
Ift88Q61371 Gm43671-201ENSMUST00000200422 433 ntBASIC11.85□□□□□ -0.51
Ift88Q61371 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Gm18056-201ENSMUST00000207670 568 ntBASIC11.85□□□□□ -0.51
Ift88Q61371 Gm18061-201ENSMUST00000208350 562 ntBASIC11.85□□□□□ -0.51
Ift88Q61371 Gm18063-201ENSMUST00000208529 568 ntBASIC11.85□□□□□ -0.51
Ift88Q61371 Gm18052-201ENSMUST00000208750 559 ntBASIC11.85□□□□□ -0.51
Ift88Q61371 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Ift88Q61371 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.85□□□□□ -0.51
Ift88Q61371 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.85□□□□□ -0.51
Ift88Q61371 Gm9257-201ENSMUST00000221254 232 ntBASIC11.85□□□□□ -0.51
Ift88Q61371 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ift88Q61371 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ift88Q61371 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Ift88Q61371 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ift88Q61371 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Ift88Q61371 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ift88Q61371 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.84□□□□□ -0.51
Ift88Q61371 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.84□□□□□ -0.51
Ift88Q61371 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ift88Q61371 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.84□□□□□ -0.51
Ift88Q61371 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Ift88Q61371 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.84□□□□□ -0.51
Ift88Q61371 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ift88Q61371 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ift88Q61371 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC11.84□□□□□ -0.51
Ift88Q61371 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC11.84□□□□□ -0.51
Ift88Q61371 Gm12389-201ENSMUST00000117696 418 ntBASIC11.84□□□□□ -0.51
Ift88Q61371 Gm15432-201ENSMUST00000121106 195 ntBASIC11.84□□□□□ -0.51
Ift88Q61371 Gm25661-201ENSMUST00000157704 296 ntBASIC11.84□□□□□ -0.51
Ift88Q61371 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.84□□□□□ -0.51
Ift88Q61371 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.84□□□□□ -0.51
Ift88Q61371 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.84□□□□□ -0.51
Ift88Q61371 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.84□□□□□ -0.51
Ift88Q61371 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.84□□□□□ -0.51
Ift88Q61371 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ift88Q61371 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC11.84□□□□□ -0.51
Ift88Q61371 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ift88Q61371 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Gm37567-201ENSMUST00000193241 2279 ntBASIC11.84□□□□□ -0.51
Ift88Q61371 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ift88Q61371 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ift88Q61371 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.83□□□□□ -0.51
Ift88Q61371 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ift88Q61371 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ift88Q61371 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Ift88Q61371 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.83□□□□□ -0.52
Ift88Q61371 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.83□□□□□ -0.52
Ift88Q61371 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.83□□□□□ -0.52
Ift88Q61371 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.83□□□□□ -0.52
Ift88Q61371 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.83□□□□□ -0.52
Ift88Q61371 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm19927-201ENSMUST00000185792 781 ntBASIC11.83□□□□□ -0.52
Ift88Q61371 Gm29199-201ENSMUST00000187766 775 ntBASIC11.83□□□□□ -0.52
Ift88Q61371 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.83□□□□□ -0.52
Ift88Q61371 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm44551-201ENSMUST00000208804 171 ntBASIC11.83□□□□□ -0.52
Ift88Q61371 Gm7319-201ENSMUST00000210047 778 ntBASIC11.83□□□□□ -0.52
Ift88Q61371 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ift88Q61371 Gm8162-201ENSMUST00000213951 665 ntBASIC11.83□□□□□ -0.52
Ift88Q61371 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ift88Q61371 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms