Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm25125-201ENSMUST00000083340 136 ntBASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm25580-201ENSMUST00000083409 327 ntBASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 AA474408-201ENSMUST00000098110 3339 ntBASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Gm25063-201ENSMUST00000104666 94 ntBASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Gm14807-201ENSMUST00000116640 983 ntBASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Gm25343-201ENSMUST00000157460 107 ntBASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Gm22379-201ENSMUST00000157480 131 ntBASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Gm27441-201ENSMUST00000185000 105 ntBASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Gm42660-201ENSMUST00000197733 947 ntBASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Id2-203ENSMUST00000222667 958 ntBASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Syne3Q4FZC9 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm12663-201ENSMUST00000118481 958 ntBASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Mir1901-201ENSMUST00000122616 78 ntBASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm25072-201ENSMUST00000175233 235 ntBASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm28324-201ENSMUST00000187913 264 ntBASIC11.43□□□□□ -0.58
Syne3Q4FZC9 Gm9369-201ENSMUST00000196009 733 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms