Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Gnb2-214ENSMUST00000168746 802 ntTSL 5 BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Gm7664-201ENSMUST00000221988 745 ntBASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Gm19045-201ENSMUST00000222488 1193 ntBASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Rpl14-ps1-201ENSMUST00000026901 653 ntBASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Spg11Q3UHA3 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Gm25763-201ENSMUST00000104099 129 ntBASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Gm14592-201ENSMUST00000117201 560 ntBASIC9.9□□□□□ -0.83
Spg11Q3UHA3 A930019D19Rik-201ENSMUST00000135360 958 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Gm29471-201ENSMUST00000190527 700 ntBASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Gm18538-201ENSMUST00000204265 484 ntBASIC9.9□□□□□ -0.83
Spg11Q3UHA3 Gm36595-201ENSMUST00000218830 2006 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Rsph14-203ENSMUST00000159994 1728 ntTSL 5 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Mypopos-202ENSMUST00000205975 2321 ntBASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Chrne-202ENSMUST00000102556 1591 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Ighv1-67-201ENSMUST00000103538 294 ntBASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Stmn1-202ENSMUST00000105867 802 ntTSL 5 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Gm8091-201ENSMUST00000150506 886 ntBASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Plut-201ENSMUST00000172461 855 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Gm21818-201ENSMUST00000178828 513 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Gm7672-201ENSMUST00000180915 872 ntBASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Gm5960-201ENSMUST00000188483 406 ntBASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Gm45706-201ENSMUST00000213063 2136 ntBASIC9.89□□□□□ -0.83
Spg11Q3UHA3 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Tpm1-203ENSMUST00000050905 1259 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Gm43165-201ENSMUST00000200842 1635 ntBASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Mettl18-201ENSMUST00000045694 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Spg11Q3UHA3 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Spg11Q3UHA3 Spc25-209ENSMUST00000167875 1194 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Spg11Q3UHA3 Gm43664-201ENSMUST00000196038 734 ntBASIC9.88□□□□□ -0.83
Spg11Q3UHA3 Gm16475-202ENSMUST00000209033 528 ntBASIC9.88□□□□□ -0.83
Spg11Q3UHA3 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC9.88□□□□□ -0.83
Spg11Q3UHA3 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC9.88□□□□□ -0.83
Spg11Q3UHA3 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Spg11Q3UHA3 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Spg11Q3UHA3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.88□□□□□ -0.83
Spg11Q3UHA3 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Spg11Q3UHA3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Spg11Q3UHA3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms