Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC12.1□□□□□ -0.47
Rrp1P56183 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rrp1P56183 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rrp1P56183 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.1□□□□□ -0.47
Rrp1P56183 Gm15197-201ENSMUST00000120526 478 ntBASIC12.1□□□□□ -0.47
Rrp1P56183 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.1□□□□□ -0.47
Rrp1P56183 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Gm22334-201ENSMUST00000158070 133 ntBASIC12.1□□□□□ -0.47
Rrp1P56183 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC12.1□□□□□ -0.47
Rrp1P56183 Gm37458-201ENSMUST00000194055 410 ntBASIC12.1□□□□□ -0.47
Rrp1P56183 Gm17831-201ENSMUST00000205579 900 ntBASIC12.1□□□□□ -0.47
Rrp1P56183 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.1□□□□□ -0.47
Rrp1P56183 Gm8162-201ENSMUST00000213951 665 ntBASIC12.1□□□□□ -0.47
Rrp1P56183 Id2-203ENSMUST00000222667 958 ntBASIC12.1□□□□□ -0.47
Rrp1P56183 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.1□□□□□ -0.47
Rrp1P56183 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Gm10263-201ENSMUST00000085163 300 ntBASIC12.1□□□□□ -0.47
Rrp1P56183 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rrp1P56183 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC12.1□□□□□ -0.47
Rrp1P56183 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.1□□□□□ -0.47
Rrp1P56183 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 AC126459.1-201ENSMUST00000214791 2123 ntBASIC12.1□□□□□ -0.47
Rrp1P56183 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp1P56183 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Rrp1P56183 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.09□□□□□ -0.47
Rrp1P56183 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.09□□□□□ -0.47
Rrp1P56183 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rrp1P56183 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.09□□□□□ -0.47
Rrp1P56183 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 CT025639.2-202ENSMUST00000225298 1630 ntBASIC12.09□□□□□ -0.47
Rrp1P56183 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.09□□□□□ -0.47
Rrp1P56183 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Rrp1P56183 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rrp1P56183 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Gm15573-201ENSMUST00000119487 540 ntBASIC12.09□□□□□ -0.47
Rrp1P56183 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.09□□□□□ -0.47
Rrp1P56183 Gm6407-201ENSMUST00000176468 549 ntBASIC12.09□□□□□ -0.47
Rrp1P56183 Gm3551-201ENSMUST00000190750 664 ntBASIC12.09□□□□□ -0.47
Rrp1P56183 Gm43163-201ENSMUST00000196571 442 ntBASIC12.09□□□□□ -0.47
Rrp1P56183 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.09□□□□□ -0.47
Rrp1P56183 Gm18466-201ENSMUST00000209147 499 ntBASIC12.09□□□□□ -0.47
Rrp1P56183 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Rrp1P56183 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rrp1P56183 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Gm25580-201ENSMUST00000083409 327 ntBASIC12.09□□□□□ -0.47
Rrp1P56183 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rrp1P56183 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rrp1P56183 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rrp1P56183 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp1P56183 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rrp1P56183 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rrp1P56183 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rrp1P56183 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp1P56183 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms