Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.5□□□□□ -0.57
NrlP54846 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.49□□□□□ -0.57
NrlP54846 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
NrlP54846 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
NrlP54846 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.49□□□□□ -0.57
NrlP54846 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.49□□□□□ -0.57
NrlP54846 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.49□□□□□ -0.57
NrlP54846 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Gm7445-201ENSMUST00000192115 340 ntBASIC11.49□□□□□ -0.57
NrlP54846 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.49□□□□□ -0.57
NrlP54846 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.49□□□□□ -0.57
NrlP54846 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.49□□□□□ -0.57
NrlP54846 AC129217.1-201ENSMUST00000225181 642 ntBASIC11.49□□□□□ -0.57
NrlP54846 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
NrlP54846 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
NrlP54846 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
NrlP54846 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.49□□□□□ -0.57
NrlP54846 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
NrlP54846 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NrlP54846 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.49□□□□□ -0.57
NrlP54846 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
NrlP54846 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NrlP54846 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
NrlP54846 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NrlP54846 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NrlP54846 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.48□□□□□ -0.57
NrlP54846 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NrlP54846 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Gm13171-201ENSMUST00000117233 391 ntBASIC11.48□□□□□ -0.57
NrlP54846 Gm6441-201ENSMUST00000120983 696 ntBASIC11.48□□□□□ -0.57
NrlP54846 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.48□□□□□ -0.57
NrlP54846 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.48□□□□□ -0.57
NrlP54846 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
NrlP54846 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.48□□□□□ -0.57
NrlP54846 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NrlP54846 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
NrlP54846 Gm25514-201ENSMUST00000083860 135 ntBASIC11.48□□□□□ -0.57
NrlP54846 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NrlP54846 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
NrlP54846 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NrlP54846 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NrlP54846 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NrlP54846 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NrlP54846 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
NrlP54846 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NrlP54846 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NrlP54846 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NrlP54846 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
NrlP54846 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.47□□□□□ -0.57
NrlP54846 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.47□□□□□ -0.57
NrlP54846 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NrlP54846 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.47□□□□□ -0.57
NrlP54846 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NrlP54846 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.47□□□□□ -0.57
NrlP54846 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NrlP54846 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC11.47□□□□□ -0.57
NrlP54846 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NrlP54846 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NrlP54846 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NrlP54846 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NrlP54846 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms