Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Gm28437-201ENSMUST00000190277 783 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Gm43104-201ENSMUST00000197234 311 ntBASIC10.73□□□□□ -0.69
Sox18P43680 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Gm43726-201ENSMUST00000199110 775 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Gm2691-201ENSMUST00000203205 901 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC10.73□□□□□ -0.69
Sox18P43680 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Sox18P43680 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Gm6304-201ENSMUST00000096579 447 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Gm10581-201ENSMUST00000097986 231 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 AC154354.1-203ENSMUST00000225565 1364 ntBASIC10.73□□□□□ -0.69
Sox18P43680 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Gm37370-201ENSMUST00000191996 1410 ntBASIC10.73□□□□□ -0.69
Sox18P43680 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.73□□□□□ -0.69
Sox18P43680 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox18P43680 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox18P43680 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.72□□□□□ -0.69
Sox18P43680 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Gm24933-201ENSMUST00000103762 110 ntBASIC10.72□□□□□ -0.69
Sox18P43680 Gm23252-201ENSMUST00000103776 110 ntBASIC10.72□□□□□ -0.69
Sox18P43680 Gm22495-201ENSMUST00000104492 126 ntBASIC10.72□□□□□ -0.69
Sox18P43680 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Gm15374-201ENSMUST00000119313 844 ntBASIC10.72□□□□□ -0.69
Sox18P43680 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 Gm14441-201ENSMUST00000121960 540 ntBASIC10.72□□□□□ -0.69
Sox18P43680 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC10.72□□□□□ -0.69
Sox18P43680 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Sox18P43680 Gm26119-201ENSMUST00000175601 104 ntBASIC10.72□□□□□ -0.69
Sox18P43680 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 Gm26443-201ENSMUST00000179610 110 ntBASIC10.72□□□□□ -0.69
Sox18P43680 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC10.72□□□□□ -0.69
Sox18P43680 Gm17944-201ENSMUST00000186351 643 ntBASIC10.72□□□□□ -0.69
Sox18P43680 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 Gm5268-201ENSMUST00000189212 940 ntBASIC10.72□□□□□ -0.69
Sox18P43680 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC10.72□□□□□ -0.69
Sox18P43680 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 Gm7443-201ENSMUST00000206355 378 ntBASIC10.72□□□□□ -0.69
Sox18P43680 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox18P43680 Gm18001-201ENSMUST00000212023 688 ntBASIC10.72□□□□□ -0.69
Sox18P43680 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sox18P43680 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sox18P43680 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox18P43680 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms