Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.63□□□□□ -0.71
Cd9P40240 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cd9P40240 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC10.62□□□□□ -0.71
Cd9P40240 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Gm14165-201ENSMUST00000121456 952 ntBASIC10.62□□□□□ -0.71
Cd9P40240 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.62□□□□□ -0.71
Cd9P40240 Gm25661-201ENSMUST00000157704 296 ntBASIC10.62□□□□□ -0.71
Cd9P40240 Gm24346-201ENSMUST00000158712 194 ntBASIC10.62□□□□□ -0.71
Cd9P40240 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Gm9358-201ENSMUST00000183067 927 ntBASIC10.62□□□□□ -0.71
Cd9P40240 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.62□□□□□ -0.71
Cd9P40240 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.62□□□□□ -0.71
Cd9P40240 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.62□□□□□ -0.71
Cd9P40240 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.62□□□□□ -0.71
Cd9P40240 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Cd9P40240 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cd9P40240 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd9P40240 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd9P40240 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd9P40240 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd9P40240 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.61□□□□□ -0.71
Cd9P40240 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd9P40240 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd9P40240 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd9P40240 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd9P40240 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd9P40240 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cd9P40240 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.61□□□□□ -0.71
Cd9P40240 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd9P40240 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.61□□□□□ -0.71
Cd9P40240 Gm25063-201ENSMUST00000104666 94 ntBASIC10.61□□□□□ -0.71
Cd9P40240 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cd9P40240 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Cd9P40240 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.61□□□□□ -0.71
Cd9P40240 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.61□□□□□ -0.71
Cd9P40240 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.61□□□□□ -0.71
Cd9P40240 Gm20781-201ENSMUST00000193154 693 ntBASIC10.61□□□□□ -0.71
Cd9P40240 Gm21736-201ENSMUST00000195399 693 ntBASIC10.61□□□□□ -0.71
Cd9P40240 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms