Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp6P0C0A3 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp6P0C0A3 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp6P0C0A3 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp6P0C0A3 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp6P0C0A3 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp6P0C0A3 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp6P0C0A3 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chmp6P0C0A3 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Gm16030-201ENSMUST00000159098 603 ntBASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Gm16165-201ENSMUST00000160140 795 ntBASIC11.74□□□□□ -0.53
Chmp6P0C0A3 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.74□□□□□ -0.53
Chmp6P0C0A3 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.74□□□□□ -0.53
Chmp6P0C0A3 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chmp6P0C0A3 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Gm12795-201ENSMUST00000117594 539 ntBASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Gm9673-201ENSMUST00000119287 781 ntBASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Gm9135-201ENSMUST00000182963 990 ntBASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.73□□□□□ -0.53
Chmp6P0C0A3 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Gm7082-201ENSMUST00000209880 969 ntBASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.73□□□□□ -0.53
Chmp6P0C0A3 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp6P0C0A3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms