Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Mir7677-201ENSMUST00000184226 67 ntBASIC7.83□□□□□ -1.16
TcraP01849 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC7.83□□□□□ -1.16
TcraP01849 AY036118-201ENSMUST00000200021 923 ntBASIC7.83□□□□□ -1.16
TcraP01849 Gm44967-201ENSMUST00000207047 631 ntBASIC7.83□□□□□ -1.16
TcraP01849 Gm45224-201ENSMUST00000208203 414 ntBASIC7.83□□□□□ -1.16
TcraP01849 Gm31941-201ENSMUST00000209689 350 ntBASIC7.83□□□□□ -1.16
TcraP01849 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC7.83□□□□□ -1.16
TcraP01849 AC125350.2-201ENSMUST00000224737 727 ntBASIC7.83□□□□□ -1.16
TcraP01849 AC159205.5-202ENSMUST00000224849 386 ntBASIC7.83□□□□□ -1.16
TcraP01849 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
TcraP01849 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
TcraP01849 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Sdhaf3-201ENSMUST00000040826 4323 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Gm37873-201ENSMUST00000194571 2280 ntBASIC7.83□□□□□ -1.16
TcraP01849 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
TcraP01849 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 AC165148.1-201ENSMUST00000224795 2372 ntBASIC7.83□□□□□ -1.16
TcraP01849 Gm38169-201ENSMUST00000191822 2539 ntBASIC7.83□□□□□ -1.16
TcraP01849 Gm28042-202ENSMUST00000129685 4472 ntAPPRIS P5 TSL 5 BASIC7.83□□□□□ -1.16
TcraP01849 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
TcraP01849 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC7.83□□□□□ -1.16
TcraP01849 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TcraP01849 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
TcraP01849 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
TcraP01849 Olfm3-202ENSMUST00000081752 4647 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Gm44597-202ENSMUST00000203287 3516 ntTSL 2 BASIC7.82□□□□□ -1.16
TcraP01849 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Gm28424-201ENSMUST00000187393 1319 ntBASIC7.82□□□□□ -1.16
TcraP01849 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
TcraP01849 Kdm2b-205ENSMUST00000121739 4107 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
TcraP01849 Btrc-206ENSMUST00000224102 3037 ntBASIC7.82□□□□□ -1.16
TcraP01849 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
TcraP01849 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
TcraP01849 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC7.82□□□□□ -1.16
TcraP01849 Slco5a1-204ENSMUST00000136197 5123 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC7.82□□□□□ -1.16
TcraP01849 Cd300a-202ENSMUST00000106582 4645 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
TcraP01849 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
TcraP01849 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC7.82□□□□□ -1.16
TcraP01849 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC7.82□□□□□ -1.16
TcraP01849 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
TcraP01849 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Gm25890-201ENSMUST00000177643 165 ntBASIC7.82□□□□□ -1.16
TcraP01849 Rnu1b2-201ENSMUST00000178073 165 ntBASIC7.82□□□□□ -1.16
TcraP01849 Rnu1b1-201ENSMUST00000178250 165 ntBASIC7.82□□□□□ -1.16
TcraP01849 Gm22614-201ENSMUST00000178300 165 ntBASIC7.82□□□□□ -1.16
TcraP01849 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Gm28746-201ENSMUST00000187453 380 ntBASIC7.82□□□□□ -1.16
TcraP01849 Gm28071-201ENSMUST00000190355 478 ntBASIC7.82□□□□□ -1.16
TcraP01849 Gm38000-201ENSMUST00000192390 1215 ntBASIC7.82□□□□□ -1.16
TcraP01849 Ighv1-62-201ENSMUST00000193406 350 ntBASIC7.82□□□□□ -1.16
TcraP01849 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC7.82□□□□□ -1.16
TcraP01849 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Gm22042-201ENSMUST00000082989 165 ntBASIC7.82□□□□□ -1.16
TcraP01849 Gm26110-201ENSMUST00000083971 165 ntBASIC7.82□□□□□ -1.16
TcraP01849 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
TcraP01849 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Gm37040-201ENSMUST00000191740 1824 ntBASIC7.82□□□□□ -1.16
TcraP01849 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TcraP01849 Olfr804-202ENSMUST00000213331 5737 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms