Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm23049-201ENSMUST00000178068 102 ntBASIC11.42□□□□□ -0.58
Itgb3O54890 Gm28019-201ENSMUST00000178138 101 ntBASIC11.42□□□□□ -0.58
Itgb3O54890 Gm25571-201ENSMUST00000178322 102 ntBASIC11.42□□□□□ -0.58
Itgb3O54890 Gm25355-201ENSMUST00000178456 101 ntBASIC11.42□□□□□ -0.58
Itgb3O54890 Gm24975-201ENSMUST00000178492 101 ntBASIC11.42□□□□□ -0.58
Itgb3O54890 Gm23189-201ENSMUST00000178954 102 ntBASIC11.42□□□□□ -0.58
Itgb3O54890 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Itgb3O54890 Gm25100-201ENSMUST00000179750 101 ntBASIC11.42□□□□□ -0.58
Itgb3O54890 Gm23064-201ENSMUST00000179866 101 ntBASIC11.42□□□□□ -0.58
Itgb3O54890 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.42□□□□□ -0.58
Itgb3O54890 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.42□□□□□ -0.58
Itgb3O54890 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Gm44640-201ENSMUST00000206894 247 ntBASIC11.42□□□□□ -0.58
Itgb3O54890 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.42□□□□□ -0.58
Itgb3O54890 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Gm25514-201ENSMUST00000083860 135 ntBASIC11.42□□□□□ -0.58
Itgb3O54890 Gm6478-201ENSMUST00000099450 742 ntBASIC11.42□□□□□ -0.58
Itgb3O54890 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Itgb3O54890 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.42□□□□□ -0.58
Itgb3O54890 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Itgb3O54890 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Itgb3O54890 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Itgb3O54890 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Gm15031-201ENSMUST00000121341 210 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.41□□□□□ -0.58
Itgb3O54890 Gm25569-201ENSMUST00000157175 131 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Gm24346-201ENSMUST00000158712 194 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Gm22876-201ENSMUST00000175450 298 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Itgb3O54890 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Gm45500-201ENSMUST00000211676 803 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Itgb3O54890 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Itgb3O54890 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Itgb3O54890 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Itgb3O54890 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Itgb3O54890 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.41□□□□□ -0.58
Itgb3O54890 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Itgb3O54890 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Itgb3O54890 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.4□□□□□ -0.58
Itgb3O54890 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Itgb3O54890 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms