Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm27953-201ENSMUST00000185171 143 ntBASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm44323-201ENSMUST00000198689 129 ntBASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm18165-201ENSMUST00000217426 928 ntBASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm23105-201ENSMUST00000083719 134 ntBASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pcdh1F7BJK1 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Gm23272-201ENSMUST00000104053 129 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Gm11411-201ENSMUST00000117951 719 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Gm15352-201ENSMUST00000118696 270 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Gm45867-201ENSMUST00000208201 2317 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Gm45398-201ENSMUST00000210561 165 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 AC124561.1-202ENSMUST00000228652 1929 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Gm5451-201ENSMUST00000080545 579 ntBASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pcdh1F7BJK1 Gm45501-201ENSMUST00000211468 2526 ntBASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms