Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.04■□□□□ 0.8
H2afb2S4R1M3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb2S4R1M3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb2S4R1M3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
H2afb2S4R1M3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.04■□□□□ 0.8
H2afb2S4R1M3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb2S4R1M3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb2S4R1M3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb2S4R1M3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb2S4R1M3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
H2afb2S4R1M3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb2S4R1M3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
H2afb2S4R1M3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
H2afb2S4R1M3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb2S4R1M3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb2S4R1M3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb2S4R1M3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.03■□□□□ 0.8
H2afb2S4R1M3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb2S4R1M3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb2S4R1M3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb2S4R1M3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H2afb2S4R1M3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
H2afb2S4R1M3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb2S4R1M3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.02■□□□□ 0.8
H2afb2S4R1M3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb2S4R1M3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb2S4R1M3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb2S4R1M3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb2S4R1M3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.02■□□□□ 0.8
H2afb2S4R1M3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb2S4R1M3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.02■□□□□ 0.8
H2afb2S4R1M3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb2S4R1M3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H2afb2S4R1M3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
H2afb2S4R1M3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb2S4R1M3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb2S4R1M3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb2S4R1M3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.01■□□□□ 0.79
H2afb2S4R1M3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb2S4R1M3 Mir6236-201ENSMUST00000184437 123 ntBASIC20.01■□□□□ 0.79
H2afb2S4R1M3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb2S4R1M3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
H2afb2S4R1M3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
H2afb2S4R1M3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H2afb2S4R1M3 Gm20634-201ENSMUST00000090779 2956 ntBASIC20■□□□□ 0.79
H2afb2S4R1M3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H2afb2S4R1M3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H2afb2S4R1M3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H2afb2S4R1M3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb2S4R1M3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.99■□□□□ 0.79
H2afb2S4R1M3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb2S4R1M3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
H2afb2S4R1M3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
H2afb2S4R1M3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb2S4R1M3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb2S4R1M3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb2S4R1M3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb2S4R1M3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb2S4R1M3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
H2afb2S4R1M3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
H2afb2S4R1M3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb2S4R1M3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb2S4R1M3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
H2afb2S4R1M3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
H2afb2S4R1M3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
H2afb2S4R1M3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb2S4R1M3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb2S4R1M3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb2S4R1M3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb2S4R1M3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.97■□□□□ 0.79
H2afb2S4R1M3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H2afb2S4R1M3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
H2afb2S4R1M3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb2S4R1M3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb2S4R1M3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb2S4R1M3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb2S4R1M3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
H2afb2S4R1M3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
H2afb2S4R1M3 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.96■□□□□ 0.79
H2afb2S4R1M3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
H2afb2S4R1M3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2afb2S4R1M3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 131.3 ms