Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb3S4R1G7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb3S4R1G7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb3S4R1G7 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.94■□□□□ 0.46
H2afb3S4R1G7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.94■□□□□ 0.46
H2afb3S4R1G7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb3S4R1G7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb3S4R1G7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
H2afb3S4R1G7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.94■□□□□ 0.46
H2afb3S4R1G7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb3S4R1G7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb3S4R1G7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb3S4R1G7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.94■□□□□ 0.46
H2afb3S4R1G7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Gm40881-201ENSMUST00000223397 166 ntBASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
H2afb3S4R1G7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.92■□□□□ 0.46
H2afb3S4R1G7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb3S4R1G7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb3S4R1G7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb3S4R1G7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb3S4R1G7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb3S4R1G7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb3S4R1G7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.9■□□□□ 0.46
H2afb3S4R1G7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
H2afb3S4R1G7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb3S4R1G7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb3S4R1G7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb3S4R1G7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
H2afb3S4R1G7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb3S4R1G7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.89■□□□□ 0.45
H2afb3S4R1G7 Gm7143-201ENSMUST00000222811 859 ntBASIC17.89■□□□□ 0.45
H2afb3S4R1G7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb3S4R1G7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb3S4R1G7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb3S4R1G7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb3S4R1G7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afb3S4R1G7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb3S4R1G7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb3S4R1G7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb3S4R1G7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.88■□□□□ 0.45
H2afb3S4R1G7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
H2afb3S4R1G7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
H2afb3S4R1G7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb3S4R1G7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afb3S4R1G7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb3S4R1G7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb3S4R1G7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb3S4R1G7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.87■□□□□ 0.45
H2afb3S4R1G7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.87■□□□□ 0.45
H2afb3S4R1G7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afb3S4R1G7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb3S4R1G7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb3S4R1G7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb3S4R1G7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms