Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col13a1Q9R1N9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col13a1Q9R1N9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.98■□□□□ 0.31
Col13a1Q9R1N9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.98■□□□□ 0.31
Col13a1Q9R1N9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.98■□□□□ 0.31
Col13a1Q9R1N9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col13a1Q9R1N9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col13a1Q9R1N9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col13a1Q9R1N9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col13a1Q9R1N9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col13a1Q9R1N9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col13a1Q9R1N9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col13a1Q9R1N9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col13a1Q9R1N9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.96■□□□□ 0.31
Col13a1Q9R1N9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col13a1Q9R1N9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col13a1Q9R1N9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.96■□□□□ 0.31
Col13a1Q9R1N9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.96■□□□□ 0.31
Col13a1Q9R1N9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col13a1Q9R1N9 Gm7143-201ENSMUST00000222811 859 ntBASIC16.96■□□□□ 0.31
Col13a1Q9R1N9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col13a1Q9R1N9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col13a1Q9R1N9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col13a1Q9R1N9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Col13a1Q9R1N9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col13a1Q9R1N9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col13a1Q9R1N9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col13a1Q9R1N9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.95■□□□□ 0.3
Col13a1Q9R1N9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.95■□□□□ 0.3
Col13a1Q9R1N9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
Col13a1Q9R1N9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.95■□□□□ 0.3
Col13a1Q9R1N9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
Col13a1Q9R1N9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col13a1Q9R1N9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col13a1Q9R1N9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col13a1Q9R1N9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col13a1Q9R1N9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col13a1Q9R1N9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col13a1Q9R1N9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col13a1Q9R1N9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col13a1Q9R1N9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col13a1Q9R1N9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col13a1Q9R1N9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col13a1Q9R1N9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col13a1Q9R1N9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col13a1Q9R1N9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col13a1Q9R1N9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Nespas-201ENSMUST00000143738 1083 ntBASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Smad6-203ENSMUST00000179458 273 ntBASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col13a1Q9R1N9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Col13a1Q9R1N9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col13a1Q9R1N9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.91■□□□□ 0.3
Col13a1Q9R1N9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col13a1Q9R1N9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col13a1Q9R1N9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col13a1Q9R1N9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col13a1Q9R1N9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col13a1Q9R1N9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col13a1Q9R1N9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.9■□□□□ 0.3
Col13a1Q9R1N9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col13a1Q9R1N9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.9■□□□□ 0.3
Col13a1Q9R1N9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col13a1Q9R1N9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms