Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh5Q9QUM7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh5Q9QUM7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.3■□□□□ 0.84
Msh5Q9QUM7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh5Q9QUM7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh5Q9QUM7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh5Q9QUM7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.3■□□□□ 0.84
Msh5Q9QUM7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh5Q9QUM7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh5Q9QUM7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh5Q9QUM7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh5Q9QUM7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh5Q9QUM7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh5Q9QUM7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Golph3-202ENSMUST00000226517 2359 ntBASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Gm15823-201ENSMUST00000064305 670 ntBASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh5Q9QUM7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.27■□□□□ 0.84
Msh5Q9QUM7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh5Q9QUM7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Msh5Q9QUM7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh5Q9QUM7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh5Q9QUM7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh5Q9QUM7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.27■□□□□ 0.83
Msh5Q9QUM7 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.26■□□□□ 0.83
Msh5Q9QUM7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Msh5Q9QUM7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.26■□□□□ 0.83
Msh5Q9QUM7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Msh5Q9QUM7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh5Q9QUM7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh5Q9QUM7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh5Q9QUM7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.25■□□□□ 0.83
Msh5Q9QUM7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.25■□□□□ 0.83
Msh5Q9QUM7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh5Q9QUM7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Msh5Q9QUM7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Msh5Q9QUM7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh5Q9QUM7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh5Q9QUM7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Msh5Q9QUM7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh5Q9QUM7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Msh5Q9QUM7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh5Q9QUM7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh5Q9QUM7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh5Q9QUM7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.24■□□□□ 0.83
Msh5Q9QUM7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Msh5Q9QUM7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh5Q9QUM7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Msh5Q9QUM7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Msh5Q9QUM7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh5Q9QUM7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh5Q9QUM7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh5Q9QUM7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.23■□□□□ 0.83
Msh5Q9QUM7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh5Q9QUM7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Msh5Q9QUM7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.23■□□□□ 0.83
Msh5Q9QUM7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh5Q9QUM7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh5Q9QUM7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh5Q9QUM7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh5Q9QUM7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh5Q9QUM7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh5Q9QUM7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh5Q9QUM7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh5Q9QUM7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh5Q9QUM7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh5Q9QUM7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh5Q9QUM7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Msh5Q9QUM7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Msh5Q9QUM7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Msh5Q9QUM7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Msh5Q9QUM7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Msh5Q9QUM7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Msh5Q9QUM7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh5Q9QUM7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh5Q9QUM7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms