Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sec61a2Q9JLR1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sec61a2Q9JLR1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Sec61a2Q9JLR1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sec61a2Q9JLR1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sec61a2Q9JLR1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sec61a2Q9JLR1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sec61a2Q9JLR1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sec61a2Q9JLR1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sec61a2Q9JLR1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Sec61a2Q9JLR1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.9■□□□□ 0.46
Sec61a2Q9JLR1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sec61a2Q9JLR1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a2Q9JLR1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a2Q9JLR1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a2Q9JLR1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a2Q9JLR1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a2Q9JLR1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sec61a2Q9JLR1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a2Q9JLR1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a2Q9JLR1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a2Q9JLR1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Sec61a2Q9JLR1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Sec61a2Q9JLR1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a2Q9JLR1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a2Q9JLR1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a2Q9JLR1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sec61a2Q9JLR1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Gm7143-201ENSMUST00000222811 859 ntBASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sec61a2Q9JLR1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sec61a2Q9JLR1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sec61a2Q9JLR1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sec61a2Q9JLR1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sec61a2Q9JLR1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Sec61a2Q9JLR1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sec61a2Q9JLR1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sec61a2Q9JLR1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Sec61a2Q9JLR1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sec61a2Q9JLR1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sec61a2Q9JLR1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a2Q9JLR1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.85■□□□□ 0.45
Sec61a2Q9JLR1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Sec61a2Q9JLR1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a2Q9JLR1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a2Q9JLR1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.85■□□□□ 0.45
Sec61a2Q9JLR1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a2Q9JLR1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a2Q9JLR1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a2Q9JLR1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a2Q9JLR1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a2Q9JLR1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a2Q9JLR1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms