Protein–RNA interactions for Protein: Q9D9H2

Cldnd2, Claudin domain-containing protein 2, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd2Q9D9H2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd2Q9D9H2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.21■□□□□ 0.35
Cldnd2Q9D9H2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd2Q9D9H2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd2Q9D9H2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd2Q9D9H2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.21■□□□□ 0.35
Cldnd2Q9D9H2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cldnd2Q9D9H2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd2Q9D9H2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Cldnd2Q9D9H2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd2Q9D9H2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd2Q9D9H2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd2Q9D9H2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd2Q9D9H2 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.2■□□□□ 0.34
Cldnd2Q9D9H2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cldnd2Q9D9H2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd2Q9D9H2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd2Q9D9H2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Cldnd2Q9D9H2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd2Q9D9H2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.19■□□□□ 0.34
Cldnd2Q9D9H2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Cldnd2Q9D9H2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd2Q9D9H2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd2Q9D9H2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.17■□□□□ 0.34
Cldnd2Q9D9H2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
Cldnd2Q9D9H2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.17■□□□□ 0.34
Cldnd2Q9D9H2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd2Q9D9H2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd2Q9D9H2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd2Q9D9H2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd2Q9D9H2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cldnd2Q9D9H2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd2Q9D9H2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cldnd2Q9D9H2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd2Q9D9H2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd2Q9D9H2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd2Q9D9H2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Cldnd2Q9D9H2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.16■□□□□ 0.34
Cldnd2Q9D9H2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd2Q9D9H2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd2Q9D9H2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd2Q9D9H2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldnd2Q9D9H2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd2Q9D9H2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd2Q9D9H2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd2Q9D9H2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd2Q9D9H2 Scarna2-201ENSMUST00000157560 414 ntBASIC17.15■□□□□ 0.34
Cldnd2Q9D9H2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd2Q9D9H2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd2Q9D9H2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd2Q9D9H2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd2Q9D9H2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.15■□□□□ 0.34
Cldnd2Q9D9H2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.15■□□□□ 0.34
Cldnd2Q9D9H2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldnd2Q9D9H2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Cldnd2Q9D9H2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Cldnd2Q9D9H2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 Gm11687-201ENSMUST00000118911 886 ntBASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Cldnd2Q9D9H2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd2Q9D9H2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd2Q9D9H2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldnd2Q9D9H2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 272.4 ms