Protein–RNA interactions for Protein: Q9D7Z6

Clca1, Calcium-activated chloride channel regulator 1, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca1Q9D7Z6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.13■□□□□ 0.81
Clca1Q9D7Z6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clca1Q9D7Z6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clca1Q9D7Z6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clca1Q9D7Z6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clca1Q9D7Z6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clca1Q9D7Z6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Clca1Q9D7Z6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Clca1Q9D7Z6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clca1Q9D7Z6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clca1Q9D7Z6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clca1Q9D7Z6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clca1Q9D7Z6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clca1Q9D7Z6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clca1Q9D7Z6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clca1Q9D7Z6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clca1Q9D7Z6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clca1Q9D7Z6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clca1Q9D7Z6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.11■□□□□ 0.81
Clca1Q9D7Z6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clca1Q9D7Z6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.11■□□□□ 0.81
Clca1Q9D7Z6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clca1Q9D7Z6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Clca1Q9D7Z6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clca1Q9D7Z6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clca1Q9D7Z6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clca1Q9D7Z6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clca1Q9D7Z6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Clca1Q9D7Z6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.1■□□□□ 0.81
Clca1Q9D7Z6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.1■□□□□ 0.81
Clca1Q9D7Z6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clca1Q9D7Z6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clca1Q9D7Z6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.09■□□□□ 0.81
Clca1Q9D7Z6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clca1Q9D7Z6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.08■□□□□ 0.81
Clca1Q9D7Z6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clca1Q9D7Z6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clca1Q9D7Z6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clca1Q9D7Z6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.08■□□□□ 0.81
Clca1Q9D7Z6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clca1Q9D7Z6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clca1Q9D7Z6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Clca1Q9D7Z6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clca1Q9D7Z6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clca1Q9D7Z6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Clca1Q9D7Z6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clca1Q9D7Z6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.07■□□□□ 0.8
Clca1Q9D7Z6 Golgb1-201ENSMUST00000023534 498 ntBASIC20.07■□□□□ 0.8
Clca1Q9D7Z6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clca1Q9D7Z6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clca1Q9D7Z6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clca1Q9D7Z6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clca1Q9D7Z6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clca1Q9D7Z6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.06■□□□□ 0.8
Clca1Q9D7Z6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.06■□□□□ 0.8
Clca1Q9D7Z6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clca1Q9D7Z6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Clca1Q9D7Z6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clca1Q9D7Z6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Clca1Q9D7Z6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clca1Q9D7Z6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clca1Q9D7Z6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clca1Q9D7Z6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clca1Q9D7Z6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clca1Q9D7Z6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clca1Q9D7Z6 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.05■□□□□ 0.8
Clca1Q9D7Z6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clca1Q9D7Z6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clca1Q9D7Z6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clca1Q9D7Z6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clca1Q9D7Z6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Clca1Q9D7Z6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clca1Q9D7Z6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clca1Q9D7Z6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clca1Q9D7Z6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clca1Q9D7Z6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clca1Q9D7Z6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms