Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rita1Q9D1H0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rita1Q9D1H0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rita1Q9D1H0 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.52■□□□□ 0.55
Rita1Q9D1H0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rita1Q9D1H0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Spcs1-204ENSMUST00000226782 949 ntBASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rita1Q9D1H0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rita1Q9D1H0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rita1Q9D1H0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rita1Q9D1H0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rita1Q9D1H0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.48■□□□□ 0.55
Rita1Q9D1H0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rita1Q9D1H0 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.48■□□□□ 0.55
Rita1Q9D1H0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rita1Q9D1H0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rita1Q9D1H0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rita1Q9D1H0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rita1Q9D1H0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.48■□□□□ 0.55
Rita1Q9D1H0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rita1Q9D1H0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rita1Q9D1H0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rita1Q9D1H0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.46■□□□□ 0.55
Rita1Q9D1H0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rita1Q9D1H0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Rita1Q9D1H0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rita1Q9D1H0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rita1Q9D1H0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Rita1Q9D1H0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rita1Q9D1H0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rita1Q9D1H0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rita1Q9D1H0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rita1Q9D1H0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rita1Q9D1H0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rita1Q9D1H0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rita1Q9D1H0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rita1Q9D1H0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rita1Q9D1H0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rita1Q9D1H0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rita1Q9D1H0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rita1Q9D1H0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rita1Q9D1H0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.45■□□□□ 0.54
Rita1Q9D1H0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rita1Q9D1H0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms