Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.71■□□□□ 0.11
Tmem88Q9D0N8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem88Q9D0N8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem88Q9D0N8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem88Q9D0N8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem88Q9D0N8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Tmem88Q9D0N8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem88Q9D0N8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem88Q9D0N8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tmem88Q9D0N8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tmem88Q9D0N8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tmem88Q9D0N8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.71■□□□□ 0.1
Tmem88Q9D0N8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tmem88Q9D0N8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Tmem88Q9D0N8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.69■□□□□ 0.1
Tmem88Q9D0N8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88Q9D0N8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.69■□□□□ 0.1
Tmem88Q9D0N8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88Q9D0N8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88Q9D0N8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88Q9D0N8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88Q9D0N8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.69■□□□□ 0.1
Tmem88Q9D0N8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88Q9D0N8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88Q9D0N8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem88Q9D0N8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem88Q9D0N8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 Mir3960-201ENSMUST00000198213 73 ntBASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tmem88Q9D0N8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tmem88Q9D0N8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88Q9D0N8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88Q9D0N8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88Q9D0N8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88Q9D0N8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88Q9D0N8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88Q9D0N8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88Q9D0N8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88Q9D0N8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88Q9D0N8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem88Q9D0N8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms