Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Chaf1bQ9D0N7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1bQ9D0N7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1bQ9D0N7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.76■□□□□ 0.59
Chaf1bQ9D0N7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.76■□□□□ 0.59
Chaf1bQ9D0N7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1bQ9D0N7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1bQ9D0N7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1bQ9D0N7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chaf1bQ9D0N7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1bQ9D0N7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1bQ9D0N7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1bQ9D0N7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1bQ9D0N7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Chaf1bQ9D0N7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1bQ9D0N7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Chaf1bQ9D0N7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chaf1bQ9D0N7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Chaf1bQ9D0N7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chaf1bQ9D0N7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.75■□□□□ 0.59
Chaf1bQ9D0N7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Chaf1bQ9D0N7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1bQ9D0N7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1bQ9D0N7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1bQ9D0N7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Chaf1bQ9D0N7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1bQ9D0N7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1bQ9D0N7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1bQ9D0N7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1bQ9D0N7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1bQ9D0N7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chaf1bQ9D0N7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1bQ9D0N7 Gm10420-201ENSMUST00000121713 882 ntBASIC18.73■□□□□ 0.59
Chaf1bQ9D0N7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.73■□□□□ 0.59
Chaf1bQ9D0N7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Chaf1bQ9D0N7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1bQ9D0N7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1bQ9D0N7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1bQ9D0N7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1bQ9D0N7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1bQ9D0N7 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.73■□□□□ 0.59
Chaf1bQ9D0N7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chaf1bQ9D0N7 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.72■□□□□ 0.59
Chaf1bQ9D0N7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chaf1bQ9D0N7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chaf1bQ9D0N7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Chaf1bQ9D0N7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chaf1bQ9D0N7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chaf1bQ9D0N7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chaf1bQ9D0N7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Chaf1bQ9D0N7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chaf1bQ9D0N7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chaf1bQ9D0N7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1bQ9D0N7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Chaf1bQ9D0N7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1bQ9D0N7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1bQ9D0N7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1bQ9D0N7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1bQ9D0N7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.7■□□□□ 0.58
Chaf1bQ9D0N7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.7■□□□□ 0.58
Chaf1bQ9D0N7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1bQ9D0N7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1bQ9D0N7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1bQ9D0N7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Chaf1bQ9D0N7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1bQ9D0N7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Chaf1bQ9D0N7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1bQ9D0N7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1bQ9D0N7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1bQ9D0N7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.68■□□□□ 0.58
Chaf1bQ9D0N7 Gm12366-201ENSMUST00000121722 873 ntBASIC18.68■□□□□ 0.58
Chaf1bQ9D0N7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.68■□□□□ 0.58
Chaf1bQ9D0N7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1bQ9D0N7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms