Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Raet1eQ9CZQ6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Raet1eQ9CZQ6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Raet1eQ9CZQ6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Raet1eQ9CZQ6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Raet1eQ9CZQ6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Raet1eQ9CZQ6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Raet1eQ9CZQ6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Raet1eQ9CZQ6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Raet1eQ9CZQ6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Raet1eQ9CZQ6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.58■□□□□ 0.41
Raet1eQ9CZQ6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Raet1eQ9CZQ6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Raet1eQ9CZQ6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Raet1eQ9CZQ6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1eQ9CZQ6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1eQ9CZQ6 Gm11687-201ENSMUST00000118911 886 ntBASIC17.58■□□□□ 0.4
Raet1eQ9CZQ6 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.58■□□□□ 0.4
Raet1eQ9CZQ6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1eQ9CZQ6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1eQ9CZQ6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Raet1eQ9CZQ6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1eQ9CZQ6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1eQ9CZQ6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1eQ9CZQ6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Raet1eQ9CZQ6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Raet1eQ9CZQ6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Raet1eQ9CZQ6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Raet1eQ9CZQ6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Raet1eQ9CZQ6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Raet1eQ9CZQ6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Raet1eQ9CZQ6 Golph3-205ENSMUST00000228671 2842 ntBASIC17.55■□□□□ 0.4
Raet1eQ9CZQ6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Raet1eQ9CZQ6 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.55■□□□□ 0.4
Raet1eQ9CZQ6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Raet1eQ9CZQ6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.55■□□□□ 0.4
Raet1eQ9CZQ6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.55■□□□□ 0.4
Raet1eQ9CZQ6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Raet1eQ9CZQ6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Raet1eQ9CZQ6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Raet1eQ9CZQ6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Raet1eQ9CZQ6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Raet1eQ9CZQ6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Raet1eQ9CZQ6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Raet1eQ9CZQ6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Raet1eQ9CZQ6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Raet1eQ9CZQ6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Raet1eQ9CZQ6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Raet1eQ9CZQ6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Raet1eQ9CZQ6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Raet1eQ9CZQ6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Raet1eQ9CZQ6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Raet1eQ9CZQ6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1eQ9CZQ6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1eQ9CZQ6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Raet1eQ9CZQ6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1eQ9CZQ6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.51■□□□□ 0.39
Raet1eQ9CZQ6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1eQ9CZQ6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1eQ9CZQ6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1eQ9CZQ6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Raet1eQ9CZQ6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Raet1eQ9CZQ6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms