Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Otud1Q9CUB6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Otud1Q9CUB6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Otud1Q9CUB6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Otud1Q9CUB6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Otud1Q9CUB6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Otud1Q9CUB6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Otud1Q9CUB6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Otud1Q9CUB6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
Otud1Q9CUB6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Otud1Q9CUB6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Otud1Q9CUB6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.93■□□□□ 0.62
Otud1Q9CUB6 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.93■□□□□ 0.62
Otud1Q9CUB6 Spcs1-204ENSMUST00000226782 949 ntBASIC18.93■□□□□ 0.62
Otud1Q9CUB6 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.93■□□□□ 0.62
Otud1Q9CUB6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Otud1Q9CUB6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Otud1Q9CUB6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Otud1Q9CUB6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Mir6236-201ENSMUST00000184437 123 ntBASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.91■□□□□ 0.62
Otud1Q9CUB6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Otud1Q9CUB6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otud1Q9CUB6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otud1Q9CUB6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Otud1Q9CUB6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otud1Q9CUB6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.9■□□□□ 0.62
Otud1Q9CUB6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otud1Q9CUB6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Otud1Q9CUB6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otud1Q9CUB6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Otud1Q9CUB6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Otud1Q9CUB6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Otud1Q9CUB6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Otud1Q9CUB6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Otud1Q9CUB6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Otud1Q9CUB6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Otud1Q9CUB6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Otud1Q9CUB6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.89■□□□□ 0.61
Otud1Q9CUB6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Otud1Q9CUB6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Otud1Q9CUB6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Otud1Q9CUB6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Otud1Q9CUB6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Otud1Q9CUB6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Otud1Q9CUB6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.89■□□□□ 0.61
Otud1Q9CUB6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Otud1Q9CUB6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otud1Q9CUB6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otud1Q9CUB6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otud1Q9CUB6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otud1Q9CUB6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otud1Q9CUB6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otud1Q9CUB6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otud1Q9CUB6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Otud1Q9CUB6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Otud1Q9CUB6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Otud1Q9CUB6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.87■□□□□ 0.61
Otud1Q9CUB6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Otud1Q9CUB6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.87■□□□□ 0.61
Otud1Q9CUB6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Otud1Q9CUB6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Otud1Q9CUB6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otud1Q9CUB6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otud1Q9CUB6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otud1Q9CUB6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otud1Q9CUB6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otud1Q9CUB6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Otud1Q9CUB6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otud1Q9CUB6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otud1Q9CUB6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otud1Q9CUB6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otud1Q9CUB6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms