Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nkiras2Q9CR56 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkiras2Q9CR56 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkiras2Q9CR56 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkiras2Q9CR56 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkiras2Q9CR56 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.93■□□□□ 0.46
Nkiras2Q9CR56 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkiras2Q9CR56 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkiras2Q9CR56 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nkiras2Q9CR56 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkiras2Q9CR56 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkiras2Q9CR56 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.92■□□□□ 0.46
Nkiras2Q9CR56 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkiras2Q9CR56 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkiras2Q9CR56 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nkiras2Q9CR56 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkiras2Q9CR56 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkiras2Q9CR56 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nkiras2Q9CR56 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.92■□□□□ 0.46
Nkiras2Q9CR56 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkiras2Q9CR56 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkiras2Q9CR56 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkiras2Q9CR56 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkiras2Q9CR56 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkiras2Q9CR56 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nkiras2Q9CR56 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkiras2Q9CR56 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.89■□□□□ 0.45
Nkiras2Q9CR56 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkiras2Q9CR56 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkiras2Q9CR56 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.89■□□□□ 0.45
Nkiras2Q9CR56 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Nkiras2Q9CR56 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Nkiras2Q9CR56 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkiras2Q9CR56 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkiras2Q9CR56 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkiras2Q9CR56 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkiras2Q9CR56 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nkiras2Q9CR56 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkiras2Q9CR56 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkiras2Q9CR56 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkiras2Q9CR56 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Nkiras2Q9CR56 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkiras2Q9CR56 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkiras2Q9CR56 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.86■□□□□ 0.45
Nkiras2Q9CR56 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkiras2Q9CR56 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkiras2Q9CR56 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkiras2Q9CR56 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkiras2Q9CR56 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkiras2Q9CR56 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.85■□□□□ 0.45
Nkiras2Q9CR56 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Nkiras2Q9CR56 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkiras2Q9CR56 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkiras2Q9CR56 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkiras2Q9CR56 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkiras2Q9CR56 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkiras2Q9CR56 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Nkiras2Q9CR56 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms