Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cldnd1Q9CQX5 Gm27801-201ENSMUST00000184174 223 ntBASIC20.71■□□□□ 0.91
Cldnd1Q9CQX5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldnd1Q9CQX5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.71■□□□□ 0.91
Cldnd1Q9CQX5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldnd1Q9CQX5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldnd1Q9CQX5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cldnd1Q9CQX5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldnd1Q9CQX5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldnd1Q9CQX5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldnd1Q9CQX5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldnd1Q9CQX5 Gm22240-201ENSMUST00000175225 82 ntBASIC20.7■□□□□ 0.9
Cldnd1Q9CQX5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cldnd1Q9CQX5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cldnd1Q9CQX5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldnd1Q9CQX5 Mir6236-201ENSMUST00000184437 123 ntBASIC20.69■□□□□ 0.9
Cldnd1Q9CQX5 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.69■□□□□ 0.9
Cldnd1Q9CQX5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Cldnd1Q9CQX5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cldnd1Q9CQX5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cldnd1Q9CQX5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cldnd1Q9CQX5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldnd1Q9CQX5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldnd1Q9CQX5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cldnd1Q9CQX5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldnd1Q9CQX5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cldnd1Q9CQX5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cldnd1Q9CQX5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Cldnd1Q9CQX5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.68■□□□□ 0.9
Cldnd1Q9CQX5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldnd1Q9CQX5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldnd1Q9CQX5 Gm4968-201ENSMUST00000071458 858 ntBASIC20.68■□□□□ 0.9
Cldnd1Q9CQX5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldnd1Q9CQX5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Cldnd1Q9CQX5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldnd1Q9CQX5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldnd1Q9CQX5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldnd1Q9CQX5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.67■□□□□ 0.9
Cldnd1Q9CQX5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.67■□□□□ 0.9
Cldnd1Q9CQX5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldnd1Q9CQX5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldnd1Q9CQX5 Gm20760-201ENSMUST00000179197 648 ntBASIC20.66■□□□□ 0.9
Cldnd1Q9CQX5 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.66■□□□□ 0.9
Cldnd1Q9CQX5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldnd1Q9CQX5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cldnd1Q9CQX5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldnd1Q9CQX5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldnd1Q9CQX5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldnd1Q9CQX5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldnd1Q9CQX5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldnd1Q9CQX5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cldnd1Q9CQX5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Cldnd1Q9CQX5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldnd1Q9CQX5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldnd1Q9CQX5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldnd1Q9CQX5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.64■□□□□ 0.9
Cldnd1Q9CQX5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldnd1Q9CQX5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cldnd1Q9CQX5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cldnd1Q9CQX5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.64■□□□□ 0.89
Cldnd1Q9CQX5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Cldnd1Q9CQX5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.64■□□□□ 0.89
Cldnd1Q9CQX5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldnd1Q9CQX5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldnd1Q9CQX5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldnd1Q9CQX5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldnd1Q9CQX5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldnd1Q9CQX5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldnd1Q9CQX5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldnd1Q9CQX5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldnd1Q9CQX5 Gm10252-201ENSMUST00000209541 832 ntBASIC20.63■□□□□ 0.89
Cldnd1Q9CQX5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Cldnd1Q9CQX5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldnd1Q9CQX5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldnd1Q9CQX5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.62■□□□□ 0.89
Cldnd1Q9CQX5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cldnd1Q9CQX5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldnd1Q9CQX5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.62■□□□□ 0.89
Cldnd1Q9CQX5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.62■□□□□ 0.89
Cldnd1Q9CQX5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cldnd1Q9CQX5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cldnd1Q9CQX5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldnd1Q9CQX5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cldnd1Q9CQX5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldnd1Q9CQX5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cldnd1Q9CQX5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cldnd1Q9CQX5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldnd1Q9CQX5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldnd1Q9CQX5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldnd1Q9CQX5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cldnd1Q9CQX5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldnd1Q9CQX5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldnd1Q9CQX5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldnd1Q9CQX5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldnd1Q9CQX5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldnd1Q9CQX5 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.6■□□□□ 0.89
Cldnd1Q9CQX5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cldnd1Q9CQX5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldnd1Q9CQX5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms