Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pcdh15Q99PJ1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh15Q99PJ1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh15Q99PJ1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh15Q99PJ1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh15Q99PJ1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC23.32■■□□□ 1.32
Pcdh15Q99PJ1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh15Q99PJ1 Gm22240-201ENSMUST00000175225 82 ntBASIC23.32■■□□□ 1.32
Pcdh15Q99PJ1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh15Q99PJ1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdh15Q99PJ1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Pcdh15Q99PJ1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdh15Q99PJ1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdh15Q99PJ1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh15Q99PJ1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.3■■□□□ 1.32
Pcdh15Q99PJ1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh15Q99PJ1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh15Q99PJ1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.3■■□□□ 1.32
Pcdh15Q99PJ1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh15Q99PJ1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh15Q99PJ1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh15Q99PJ1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Pcdh15Q99PJ1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdh15Q99PJ1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.29■■□□□ 1.32
Pcdh15Q99PJ1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdh15Q99PJ1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdh15Q99PJ1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdh15Q99PJ1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdh15Q99PJ1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Pcdh15Q99PJ1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Pcdh15Q99PJ1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdh15Q99PJ1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Pcdh15Q99PJ1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Pcdh15Q99PJ1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdh15Q99PJ1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdh15Q99PJ1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdh15Q99PJ1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
Pcdh15Q99PJ1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC23.27■■□□□ 1.32
Pcdh15Q99PJ1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdh15Q99PJ1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdh15Q99PJ1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdh15Q99PJ1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Pcdh15Q99PJ1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdh15Q99PJ1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdh15Q99PJ1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC23.25■■□□□ 1.31
Pcdh15Q99PJ1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC23.25■■□□□ 1.31
Pcdh15Q99PJ1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdh15Q99PJ1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdh15Q99PJ1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC23.25■■□□□ 1.31
Pcdh15Q99PJ1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.25■■□□□ 1.31
Pcdh15Q99PJ1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC23.25■■□□□ 1.31
Pcdh15Q99PJ1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Pcdh15Q99PJ1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh15Q99PJ1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh15Q99PJ1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh15Q99PJ1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh15Q99PJ1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.24■■□□□ 1.31
Pcdh15Q99PJ1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh15Q99PJ1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC23.23■■□□□ 1.31
Pcdh15Q99PJ1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh15Q99PJ1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh15Q99PJ1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh15Q99PJ1 Gm13168-201ENSMUST00000121771 632 ntBASIC23.23■■□□□ 1.31
Pcdh15Q99PJ1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC23.23■■□□□ 1.31
Pcdh15Q99PJ1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh15Q99PJ1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh15Q99PJ1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh15Q99PJ1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh15Q99PJ1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh15Q99PJ1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh15Q99PJ1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh15Q99PJ1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh15Q99PJ1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh15Q99PJ1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Pcdh15Q99PJ1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdh15Q99PJ1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Pcdh15Q99PJ1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC23.21■■□□□ 1.31
Pcdh15Q99PJ1 Gm13146-201ENSMUST00000118508 780 ntBASIC23.21■■□□□ 1.31
Pcdh15Q99PJ1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdh15Q99PJ1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdh15Q99PJ1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Pcdh15Q99PJ1 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.21■■□□□ 1.31
Pcdh15Q99PJ1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh15Q99PJ1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.2■■□□□ 1.3
Pcdh15Q99PJ1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh15Q99PJ1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh15Q99PJ1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.2■■□□□ 1.3
Pcdh15Q99PJ1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.2■■□□□ 1.3
Pcdh15Q99PJ1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh15Q99PJ1 Gm8520-201ENSMUST00000186517 868 ntBASIC23.2■■□□□ 1.3
Pcdh15Q99PJ1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC23.19■■□□□ 1.3
Pcdh15Q99PJ1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdh15Q99PJ1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.19■■□□□ 1.3
Pcdh15Q99PJ1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdh15Q99PJ1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdh15Q99PJ1 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.19■■□□□ 1.3
Pcdh15Q99PJ1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdh15Q99PJ1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdh15Q99PJ1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh15Q99PJ1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms