Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.85■□□□□ 0.61
Nkd1Q99MH6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.85■□□□□ 0.61
Nkd1Q99MH6 Gm10232-201ENSMUST00000089221 720 ntBASIC18.85■□□□□ 0.61
Nkd1Q99MH6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkd1Q99MH6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nkd1Q99MH6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd1Q99MH6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd1Q99MH6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Nkd1Q99MH6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd1Q99MH6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd1Q99MH6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd1Q99MH6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.84■□□□□ 0.61
Nkd1Q99MH6 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.84■□□□□ 0.61
Nkd1Q99MH6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nkd1Q99MH6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd1Q99MH6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd1Q99MH6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkd1Q99MH6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkd1Q99MH6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nkd1Q99MH6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nkd1Q99MH6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.6
Nkd1Q99MH6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkd1Q99MH6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkd1Q99MH6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Nkd1Q99MH6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkd1Q99MH6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkd1Q99MH6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkd1Q99MH6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkd1Q99MH6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.8■□□□□ 0.6
Nkd1Q99MH6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkd1Q99MH6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkd1Q99MH6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nkd1Q99MH6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkd1Q99MH6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkd1Q99MH6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkd1Q99MH6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkd1Q99MH6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nkd1Q99MH6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nkd1Q99MH6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkd1Q99MH6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.78■□□□□ 0.6
Nkd1Q99MH6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkd1Q99MH6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkd1Q99MH6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkd1Q99MH6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Nkd1Q99MH6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkd1Q99MH6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nkd1Q99MH6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkd1Q99MH6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd1Q99MH6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd1Q99MH6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd1Q99MH6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.77■□□□□ 0.6
Nkd1Q99MH6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd1Q99MH6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkd1Q99MH6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkd1Q99MH6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkd1Q99MH6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd1Q99MH6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd1Q99MH6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.76■□□□□ 0.59
Nkd1Q99MH6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.76■□□□□ 0.59
Nkd1Q99MH6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd1Q99MH6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd1Q99MH6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkd1Q99MH6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms