Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cstf1Q99LC2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Cstf1Q99LC2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.02■□□□□ 0.79
Cstf1Q99LC2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cstf1Q99LC2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cstf1Q99LC2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cstf1Q99LC2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20■□□□□ 0.79
Cstf1Q99LC2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cstf1Q99LC2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cstf1Q99LC2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20■□□□□ 0.79
Cstf1Q99LC2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cstf1Q99LC2 Nespas-201ENSMUST00000143738 1083 ntBASIC20■□□□□ 0.79
Cstf1Q99LC2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cstf1Q99LC2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cstf1Q99LC2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20■□□□□ 0.79
Cstf1Q99LC2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Cstf1Q99LC2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cstf1Q99LC2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cstf1Q99LC2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cstf1Q99LC2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20■□□□□ 0.79
Cstf1Q99LC2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cstf1Q99LC2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cstf1Q99LC2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cstf1Q99LC2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cstf1Q99LC2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.99■□□□□ 0.79
Cstf1Q99LC2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cstf1Q99LC2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cstf1Q99LC2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cstf1Q99LC2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cstf1Q99LC2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cstf1Q99LC2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cstf1Q99LC2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cstf1Q99LC2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cstf1Q99LC2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cstf1Q99LC2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.97■□□□□ 0.79
Cstf1Q99LC2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Cstf1Q99LC2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cstf1Q99LC2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cstf1Q99LC2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cstf1Q99LC2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cstf1Q99LC2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cstf1Q99LC2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cstf1Q99LC2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cstf1Q99LC2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cstf1Q99LC2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cstf1Q99LC2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cstf1Q99LC2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cstf1Q99LC2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cstf1Q99LC2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.95■□□□□ 0.78
Cstf1Q99LC2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.95■□□□□ 0.78
Cstf1Q99LC2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cstf1Q99LC2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cstf1Q99LC2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cstf1Q99LC2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cstf1Q99LC2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cstf1Q99LC2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cstf1Q99LC2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cstf1Q99LC2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cstf1Q99LC2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cstf1Q99LC2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Cstf1Q99LC2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cstf1Q99LC2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cstf1Q99LC2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.94■□□□□ 0.78
Cstf1Q99LC2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cstf1Q99LC2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cstf1Q99LC2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cstf1Q99LC2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cstf1Q99LC2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.93■□□□□ 0.78
Cstf1Q99LC2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Cstf1Q99LC2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cstf1Q99LC2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.93■□□□□ 0.78
Cstf1Q99LC2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms