Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcd2Q99JR8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcd2Q99JR8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcd2Q99JR8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Smarcd2Q99JR8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcd2Q99JR8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcd2Q99JR8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcd2Q99JR8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcd2Q99JR8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.37■□□□□ 0.85
Smarcd2Q99JR8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.37■□□□□ 0.85
Smarcd2Q99JR8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcd2Q99JR8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcd2Q99JR8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Smarcd2Q99JR8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcd2Q99JR8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
Smarcd2Q99JR8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcd2Q99JR8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcd2Q99JR8 Gm9988-201ENSMUST00000069786 435 ntBASIC20.36■□□□□ 0.85
Smarcd2Q99JR8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcd2Q99JR8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcd2Q99JR8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd2Q99JR8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd2Q99JR8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.35■□□□□ 0.85
Smarcd2Q99JR8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd2Q99JR8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd2Q99JR8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd2Q99JR8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd2Q99JR8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd2Q99JR8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd2Q99JR8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcd2Q99JR8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcd2Q99JR8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.33■□□□□ 0.85
Smarcd2Q99JR8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.33■□□□□ 0.85
Smarcd2Q99JR8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.33■□□□□ 0.85
Smarcd2Q99JR8 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.33■□□□□ 0.85
Smarcd2Q99JR8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcd2Q99JR8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcd2Q99JR8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcd2Q99JR8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcd2Q99JR8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcd2Q99JR8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcd2Q99JR8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcd2Q99JR8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.32■□□□□ 0.84
Smarcd2Q99JR8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.32■□□□□ 0.84
Smarcd2Q99JR8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.32■□□□□ 0.84
Smarcd2Q99JR8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.32■□□□□ 0.84
Smarcd2Q99JR8 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.32■□□□□ 0.84
Smarcd2Q99JR8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcd2Q99JR8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcd2Q99JR8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcd2Q99JR8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.3■□□□□ 0.84
Smarcd2Q99JR8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcd2Q99JR8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcd2Q99JR8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcd2Q99JR8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Smarcd2Q99JR8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcd2Q99JR8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Smarcd2Q99JR8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcd2Q99JR8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Smarcd2Q99JR8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcd2Q99JR8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcd2Q99JR8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcd2Q99JR8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcd2Q99JR8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcd2Q99JR8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcd2Q99JR8 Gm13234-201ENSMUST00000120010 747 ntBASIC20.28■□□□□ 0.84
Smarcd2Q99JR8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.28■□□□□ 0.84
Smarcd2Q99JR8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.28■□□□□ 0.84
Smarcd2Q99JR8 Gm27801-201ENSMUST00000184174 223 ntBASIC20.28■□□□□ 0.84
Smarcd2Q99JR8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.28■□□□□ 0.84
Smarcd2Q99JR8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcd2Q99JR8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcd2Q99JR8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcd2Q99JR8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.27■□□□□ 0.84
Smarcd2Q99JR8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcd2Q99JR8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms