Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdk9Q99J95 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdk9Q99J95 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdk9Q99J95 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdk9Q99J95 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdk9Q99J95 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdk9Q99J95 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk9Q99J95 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.05■□□□□ 0.8
Cdk9Q99J95 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk9Q99J95 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.05■□□□□ 0.8
Cdk9Q99J95 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Cdk9Q99J95 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk9Q99J95 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cdk9Q99J95 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk9Q99J95 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk9Q99J95 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk9Q99J95 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk9Q99J95 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk9Q99J95 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk9Q99J95 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk9Q99J95 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk9Q99J95 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cdk9Q99J95 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk9Q99J95 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdk9Q99J95 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk9Q99J95 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk9Q99J95 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.03■□□□□ 0.8
Cdk9Q99J95 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk9Q99J95 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.03■□□□□ 0.8
Cdk9Q99J95 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cdk9Q99J95 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk9Q99J95 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk9Q99J95 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.03■□□□□ 0.8
Cdk9Q99J95 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk9Q99J95 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdk9Q99J95 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.02■□□□□ 0.8
Cdk9Q99J95 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.02■□□□□ 0.8
Cdk9Q99J95 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdk9Q99J95 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdk9Q99J95 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cdk9Q99J95 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.02■□□□□ 0.8
Cdk9Q99J95 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cdk9Q99J95 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdk9Q99J95 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdk9Q99J95 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdk9Q99J95 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk9Q99J95 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk9Q99J95 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdk9Q99J95 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk9Q99J95 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk9Q99J95 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cdk9Q99J95 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk9Q99J95 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdk9Q99J95 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk9Q99J95 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cdk9Q99J95 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cdk9Q99J95 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.99■□□□□ 0.79
Cdk9Q99J95 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk9Q99J95 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk9Q99J95 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk9Q99J95 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.98■□□□□ 0.79
Cdk9Q99J95 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk9Q99J95 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.98■□□□□ 0.79
Cdk9Q99J95 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Cdk9Q99J95 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk9Q99J95 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk9Q99J95 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdk9Q99J95 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk9Q99J95 Golph3-205ENSMUST00000228671 2842 ntBASIC19.97■□□□□ 0.79
Cdk9Q99J95 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk9Q99J95 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk9Q99J95 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cdk9Q99J95 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk9Q99J95 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
Cdk9Q99J95 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk9Q99J95 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk9Q99J95 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdk9Q99J95 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk9Q99J95 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk9Q99J95 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk9Q99J95 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk9Q99J95 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cdk9Q99J95 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk9Q99J95 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk9Q99J95 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cdk9Q99J95 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdk9Q99J95 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms