Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.44■□□□□ 0.7
Pcdha8Q91Y12 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha8Q91Y12 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdha8Q91Y12 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha8Q91Y12 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha8Q91Y12 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha8Q91Y12 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha8Q91Y12 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha8Q91Y12 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha8Q91Y12 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha8Q91Y12 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.41■□□□□ 0.7
Pcdha8Q91Y12 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha8Q91Y12 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdha8Q91Y12 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Pcdha8Q91Y12 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha8Q91Y12 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdha8Q91Y12 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.4■□□□□ 0.7
Pcdha8Q91Y12 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha8Q91Y12 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha8Q91Y12 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha8Q91Y12 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdha8Q91Y12 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdha8Q91Y12 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdha8Q91Y12 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha8Q91Y12 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdha8Q91Y12 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha8Q91Y12 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha8Q91Y12 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha8Q91Y12 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha8Q91Y12 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Pcdha8Q91Y12 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdha8Q91Y12 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha8Q91Y12 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdha8Q91Y12 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha8Q91Y12 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdha8Q91Y12 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha8Q91Y12 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha8Q91Y12 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdha8Q91Y12 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha8Q91Y12 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdha8Q91Y12 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Gm43530-201ENSMUST00000195920 274 ntBASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha8Q91Y12 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms