Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdha9Q91Y11 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha9Q91Y11 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdha9Q91Y11 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.33■■□□□ 1.01
Pcdha9Q91Y11 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.33■■□□□ 1.01
Pcdha9Q91Y11 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha9Q91Y11 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.33■■□□□ 1.01
Pcdha9Q91Y11 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Pcdha9Q91Y11 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pcdha9Q91Y11 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Pcdha9Q91Y11 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Pcdha9Q91Y11 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.33■■□□□ 1
Pcdha9Q91Y11 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdha9Q91Y11 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdha9Q91Y11 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.32■■□□□ 1
Pcdha9Q91Y11 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha9Q91Y11 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha9Q91Y11 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdha9Q91Y11 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Pcdha9Q91Y11 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.31■■□□□ 1
Pcdha9Q91Y11 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha9Q91Y11 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdha9Q91Y11 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha9Q91Y11 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha9Q91Y11 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha9Q91Y11 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.29■■□□□ 1
Pcdha9Q91Y11 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha9Q91Y11 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdha9Q91Y11 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdha9Q91Y11 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha9Q91Y11 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.29■■□□□ 1
Pcdha9Q91Y11 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.29■■□□□ 1
Pcdha9Q91Y11 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha9Q91Y11 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha9Q91Y11 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha9Q91Y11 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha9Q91Y11 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdha9Q91Y11 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha9Q91Y11 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha9Q91Y11 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.28■■□□□ 1
Pcdha9Q91Y11 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha9Q91Y11 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Pcdha9Q91Y11 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
Pcdha9Q91Y11 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha9Q91Y11 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha9Q91Y11 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pcdha9Q91Y11 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.27■■□□□ 1
Pcdha9Q91Y11 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdha9Q91Y11 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha9Q91Y11 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.27■■□□□ 1
Pcdha9Q91Y11 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha9Q91Y11 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha9Q91Y11 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdha9Q91Y11 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Gm12821-201ENSMUST00000120022 600 ntBASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Gm43137-201ENSMUST00000198052 594 ntBASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha9Q91Y11 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Pcdha9Q91Y11 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms