Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdhb1Q91Y08 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb1Q91Y08 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb1Q91Y08 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb1Q91Y08 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb1Q91Y08 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb1Q91Y08 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb1Q91Y08 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Pcdhb1Q91Y08 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb1Q91Y08 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb1Q91Y08 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Pcdhb1Q91Y08 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb1Q91Y08 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb1Q91Y08 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdhb1Q91Y08 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb1Q91Y08 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb1Q91Y08 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb1Q91Y08 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb1Q91Y08 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb1Q91Y08 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb1Q91Y08 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb1Q91Y08 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb1Q91Y08 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdhb1Q91Y08 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb1Q91Y08 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb1Q91Y08 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb1Q91Y08 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhb1Q91Y08 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb1Q91Y08 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pcdhb1Q91Y08 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdhb1Q91Y08 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb1Q91Y08 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.8■□□□□ 0.92
Pcdhb1Q91Y08 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb1Q91Y08 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb1Q91Y08 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb1Q91Y08 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb1Q91Y08 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb1Q91Y08 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb1Q91Y08 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb1Q91Y08 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb1Q91Y08 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb1Q91Y08 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb1Q91Y08 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb1Q91Y08 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb1Q91Y08 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.79■□□□□ 0.92
Pcdhb1Q91Y08 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhb1Q91Y08 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb1Q91Y08 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdhb1Q91Y08 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb1Q91Y08 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhb1Q91Y08 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Pcdhb1Q91Y08 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb1Q91Y08 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhb1Q91Y08 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb1Q91Y08 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb1Q91Y08 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdhb1Q91Y08 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pcdhb1Q91Y08 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb1Q91Y08 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb1Q91Y08 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb1Q91Y08 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb1Q91Y08 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb1Q91Y08 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb1Q91Y08 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb1Q91Y08 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcdhb1Q91Y08 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdhb1Q91Y08 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb1Q91Y08 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb1Q91Y08 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb1Q91Y08 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb1Q91Y08 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms