Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb3Q91XZ7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb3Q91XZ7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhb3Q91XZ7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb3Q91XZ7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb3Q91XZ7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb3Q91XZ7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhb3Q91XZ7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb3Q91XZ7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb3Q91XZ7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb3Q91XZ7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb3Q91XZ7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb3Q91XZ7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.86■□□□□ 0.77
Pcdhb3Q91XZ7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb3Q91XZ7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 Gm15820-201ENSMUST00000201566 728 ntBASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb3Q91XZ7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb3Q91XZ7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb3Q91XZ7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb3Q91XZ7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb3Q91XZ7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Pcdhb3Q91XZ7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb3Q91XZ7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb3Q91XZ7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb3Q91XZ7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.83■□□□□ 0.76
Pcdhb3Q91XZ7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb3Q91XZ7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb3Q91XZ7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb3Q91XZ7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb3Q91XZ7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb3Q91XZ7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb3Q91XZ7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb3Q91XZ7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhb3Q91XZ7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb3Q91XZ7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb3Q91XZ7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb3Q91XZ7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb3Q91XZ7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb3Q91XZ7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb3Q91XZ7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdhb3Q91XZ7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb3Q91XZ7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb3Q91XZ7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb3Q91XZ7 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.81■□□□□ 0.76
Pcdhb3Q91XZ7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb3Q91XZ7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhb3Q91XZ7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.8■□□□□ 0.76
Pcdhb3Q91XZ7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb3Q91XZ7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Pcdhb3Q91XZ7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb3Q91XZ7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb3Q91XZ7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb3Q91XZ7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb3Q91XZ7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb3Q91XZ7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb3Q91XZ7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb3Q91XZ7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb3Q91XZ7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb3Q91XZ7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb3Q91XZ7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdhb3Q91XZ7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms