Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vsx1Q91V10 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vsx1Q91V10 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vsx1Q91V10 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vsx1Q91V10 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.84■□□□□ 0.77
Vsx1Q91V10 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vsx1Q91V10 Gm12933-201ENSMUST00000120203 872 ntBASIC19.84■□□□□ 0.77
Vsx1Q91V10 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vsx1Q91V10 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vsx1Q91V10 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vsx1Q91V10 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vsx1Q91V10 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vsx1Q91V10 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vsx1Q91V10 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.83■□□□□ 0.77
Vsx1Q91V10 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vsx1Q91V10 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Vsx1Q91V10 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Vsx1Q91V10 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vsx1Q91V10 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vsx1Q91V10 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx1Q91V10 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx1Q91V10 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx1Q91V10 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx1Q91V10 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx1Q91V10 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.82■□□□□ 0.76
Vsx1Q91V10 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.82■□□□□ 0.76
Vsx1Q91V10 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx1Q91V10 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx1Q91V10 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vsx1Q91V10 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Vsx1Q91V10 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.82■□□□□ 0.76
Vsx1Q91V10 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.82■□□□□ 0.76
Vsx1Q91V10 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.81■□□□□ 0.76
Vsx1Q91V10 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Vsx1Q91V10 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.81■□□□□ 0.76
Vsx1Q91V10 Nespas-201ENSMUST00000143738 1083 ntBASIC19.81■□□□□ 0.76
Vsx1Q91V10 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.81■□□□□ 0.76
Vsx1Q91V10 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vsx1Q91V10 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.81■□□□□ 0.76
Vsx1Q91V10 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Vsx1Q91V10 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vsx1Q91V10 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vsx1Q91V10 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Vsx1Q91V10 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.8■□□□□ 0.76
Vsx1Q91V10 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vsx1Q91V10 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vsx1Q91V10 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Vsx1Q91V10 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx1Q91V10 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx1Q91V10 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vsx1Q91V10 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.78■□□□□ 0.76
Vsx1Q91V10 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Vsx1Q91V10 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Vsx1Q91V10 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vsx1Q91V10 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vsx1Q91V10 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vsx1Q91V10 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vsx1Q91V10 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.77■□□□□ 0.76
Vsx1Q91V10 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Vsx1Q91V10 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx1Q91V10 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx1Q91V10 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx1Q91V10 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Vsx1Q91V10 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.76■□□□□ 0.75
Vsx1Q91V10 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Vsx1Q91V10 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Vsx1Q91V10 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.76■□□□□ 0.75
Vsx1Q91V10 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Vsx1Q91V10 Gm10653-202ENSMUST00000139570 835 ntBASIC19.76■□□□□ 0.75
Vsx1Q91V10 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx1Q91V10 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx1Q91V10 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx1Q91V10 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vsx1Q91V10 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms