Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Odf4Q8VI88 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Odf4Q8VI88 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Odf4Q8VI88 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Odf4Q8VI88 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Odf4Q8VI88 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Odf4Q8VI88 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Odf4Q8VI88 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.68■□□□□ 0.42
Odf4Q8VI88 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.68■□□□□ 0.42
Odf4Q8VI88 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.68■□□□□ 0.42
Odf4Q8VI88 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Odf4Q8VI88 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Odf4Q8VI88 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Odf4Q8VI88 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Odf4Q8VI88 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.67■□□□□ 0.42
Odf4Q8VI88 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Odf4Q8VI88 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Odf4Q8VI88 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Odf4Q8VI88 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.67■□□□□ 0.42
Odf4Q8VI88 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Odf4Q8VI88 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Odf4Q8VI88 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Odf4Q8VI88 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Odf4Q8VI88 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Odf4Q8VI88 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Odf4Q8VI88 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Odf4Q8VI88 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Odf4Q8VI88 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Odf4Q8VI88 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Odf4Q8VI88 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Odf4Q8VI88 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Odf4Q8VI88 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.65■□□□□ 0.42
Odf4Q8VI88 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Odf4Q8VI88 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Odf4Q8VI88 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.65■□□□□ 0.42
Odf4Q8VI88 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.64■□□□□ 0.42
Odf4Q8VI88 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Odf4Q8VI88 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Odf4Q8VI88 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Odf4Q8VI88 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Odf4Q8VI88 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.64■□□□□ 0.41
Odf4Q8VI88 Golgb1-201ENSMUST00000023534 498 ntBASIC17.64■□□□□ 0.41
Odf4Q8VI88 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Odf4Q8VI88 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Odf4Q8VI88 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Odf4Q8VI88 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Odf4Q8VI88 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Odf4Q8VI88 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Odf4Q8VI88 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Odf4Q8VI88 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Odf4Q8VI88 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.63■□□□□ 0.41
Odf4Q8VI88 Gm12821-201ENSMUST00000120022 600 ntBASIC17.63■□□□□ 0.41
Odf4Q8VI88 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.63■□□□□ 0.41
Odf4Q8VI88 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Odf4Q8VI88 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Odf4Q8VI88 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms