Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh18Q8VHR0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh18Q8VHR0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdh18Q8VHR0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh18Q8VHR0 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.16■□□□□ 0.66
Pcdh18Q8VHR0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh18Q8VHR0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.16■□□□□ 0.66
Pcdh18Q8VHR0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh18Q8VHR0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdh18Q8VHR0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh18Q8VHR0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh18Q8VHR0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh18Q8VHR0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdh18Q8VHR0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh18Q8VHR0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh18Q8VHR0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdh18Q8VHR0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdh18Q8VHR0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh18Q8VHR0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pcdh18Q8VHR0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh18Q8VHR0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.14■□□□□ 0.65
Pcdh18Q8VHR0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh18Q8VHR0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh18Q8VHR0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh18Q8VHR0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Pcdh18Q8VHR0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh18Q8VHR0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh18Q8VHR0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh18Q8VHR0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Pcdh18Q8VHR0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh18Q8VHR0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh18Q8VHR0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh18Q8VHR0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh18Q8VHR0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdh18Q8VHR0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh18Q8VHR0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdh18Q8VHR0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pcdh18Q8VHR0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh18Q8VHR0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.12■□□□□ 0.65
Pcdh18Q8VHR0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh18Q8VHR0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh18Q8VHR0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh18Q8VHR0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh18Q8VHR0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh18Q8VHR0 Gm45444-201ENSMUST00000211394 898 ntBASIC19.11■□□□□ 0.65
Pcdh18Q8VHR0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh18Q8VHR0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.11■□□□□ 0.65
Pcdh18Q8VHR0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh18Q8VHR0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Pcdh18Q8VHR0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh18Q8VHR0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh18Q8VHR0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh18Q8VHR0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh18Q8VHR0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh18Q8VHR0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh18Q8VHR0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdh18Q8VHR0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdh18Q8VHR0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pcdh18Q8VHR0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh18Q8VHR0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh18Q8VHR0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh18Q8VHR0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh18Q8VHR0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh18Q8VHR0 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.09■□□□□ 0.65
Pcdh18Q8VHR0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh18Q8VHR0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh18Q8VHR0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh18Q8VHR0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh18Q8VHR0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh18Q8VHR0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh18Q8VHR0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh18Q8VHR0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh18Q8VHR0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.08■□□□□ 0.65
Pcdh18Q8VHR0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Pcdh18Q8VHR0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh18Q8VHR0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.08■□□□□ 0.65
Pcdh18Q8VHR0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh18Q8VHR0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh18Q8VHR0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh18Q8VHR0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.08■□□□□ 0.64
Pcdh18Q8VHR0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh18Q8VHR0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh18Q8VHR0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh18Q8VHR0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh18Q8VHR0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh18Q8VHR0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh18Q8VHR0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh18Q8VHR0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh18Q8VHR0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh18Q8VHR0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdh18Q8VHR0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pcdh18Q8VHR0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms