Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr1Q8VHP6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Cdhr1Q8VHP6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr1Q8VHP6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr1Q8VHP6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cdhr1Q8VHP6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cdhr1Q8VHP6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr1Q8VHP6 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.55■□□□□ 0.72
Cdhr1Q8VHP6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdhr1Q8VHP6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdhr1Q8VHP6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdhr1Q8VHP6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdhr1Q8VHP6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cdhr1Q8VHP6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdhr1Q8VHP6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdhr1Q8VHP6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdhr1Q8VHP6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdhr1Q8VHP6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cdhr1Q8VHP6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 Smad6-203ENSMUST00000179458 273 ntBASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdhr1Q8VHP6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdhr1Q8VHP6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdhr1Q8VHP6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdhr1Q8VHP6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdhr1Q8VHP6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cdhr1Q8VHP6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.52■□□□□ 0.72
Cdhr1Q8VHP6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.52■□□□□ 0.72
Cdhr1Q8VHP6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cdhr1Q8VHP6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdhr1Q8VHP6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdhr1Q8VHP6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdhr1Q8VHP6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdhr1Q8VHP6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdhr1Q8VHP6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
Cdhr1Q8VHP6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdhr1Q8VHP6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.5■□□□□ 0.71
Cdhr1Q8VHP6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cdhr1Q8VHP6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdhr1Q8VHP6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdhr1Q8VHP6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdhr1Q8VHP6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Cdhr1Q8VHP6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdhr1Q8VHP6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdhr1Q8VHP6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdhr1Q8VHP6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdhr1Q8VHP6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdhr1Q8VHP6 Mir6236-201ENSMUST00000184437 123 ntBASIC19.49■□□□□ 0.71
Cdhr1Q8VHP6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Cdhr1Q8VHP6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
Cdhr1Q8VHP6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cdhr1Q8VHP6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr1Q8VHP6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr1Q8VHP6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr1Q8VHP6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr1Q8VHP6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr1Q8VHP6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cdhr1Q8VHP6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdhr1Q8VHP6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cdhr1Q8VHP6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cdhr1Q8VHP6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdhr1Q8VHP6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdhr1Q8VHP6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdhr1Q8VHP6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cdhr1Q8VHP6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdhr1Q8VHP6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdhr1Q8VHP6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdhr1Q8VHP6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdhr1Q8VHP6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdhr1Q8VHP6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdhr1Q8VHP6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.46■□□□□ 0.71
Cdhr1Q8VHP6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.46■□□□□ 0.71
Cdhr1Q8VHP6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.46■□□□□ 0.71
Cdhr1Q8VHP6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms