Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Dnajc28Q8VCE1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Dnajc28Q8VCE1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.78■■□□□ 1.08
Dnajc28Q8VCE1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Dnajc28Q8VCE1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Dnajc28Q8VCE1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
Dnajc28Q8VCE1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
Dnajc28Q8VCE1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Dnajc28Q8VCE1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Dnajc28Q8VCE1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Dnajc28Q8VCE1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Dnajc28Q8VCE1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Dnajc28Q8VCE1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Dnajc28Q8VCE1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.77■■□□□ 1.08
Dnajc28Q8VCE1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Dnajc28Q8VCE1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.77■■□□□ 1.08
Dnajc28Q8VCE1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Dnajc28Q8VCE1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Dnajc28Q8VCE1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Dnajc28Q8VCE1 Spcs1-204ENSMUST00000226782 949 ntBASIC21.77■■□□□ 1.08
Dnajc28Q8VCE1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Dnajc28Q8VCE1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Dnajc28Q8VCE1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Dnajc28Q8VCE1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Dnajc28Q8VCE1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Dnajc28Q8VCE1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Dnajc28Q8VCE1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Dnajc28Q8VCE1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Dnajc28Q8VCE1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.76■■□□□ 1.07
Dnajc28Q8VCE1 Gm26833-201ENSMUST00000180899 440 ntBASIC21.76■■□□□ 1.07
Dnajc28Q8VCE1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Dnajc28Q8VCE1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Dnajc28Q8VCE1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Dnajc28Q8VCE1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Dnajc28Q8VCE1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Dnajc28Q8VCE1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Dnajc28Q8VCE1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Dnajc28Q8VCE1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.75■■□□□ 1.07
Dnajc28Q8VCE1 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.75■■□□□ 1.07
Dnajc28Q8VCE1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Dnajc28Q8VCE1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.75■■□□□ 1.07
Dnajc28Q8VCE1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Dnajc28Q8VCE1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Dnajc28Q8VCE1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Dnajc28Q8VCE1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Dnajc28Q8VCE1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.74■■□□□ 1.07
Dnajc28Q8VCE1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Dnajc28Q8VCE1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Dnajc28Q8VCE1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Dnajc28Q8VCE1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Dnajc28Q8VCE1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Dnajc28Q8VCE1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Dnajc28Q8VCE1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Dnajc28Q8VCE1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Dnajc28Q8VCE1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Dnajc28Q8VCE1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Dnajc28Q8VCE1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Dnajc28Q8VCE1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Dnajc28Q8VCE1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Dnajc28Q8VCE1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Dnajc28Q8VCE1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.71■■□□□ 1.07
Dnajc28Q8VCE1 Gm29257-201ENSMUST00000186115 639 ntBASIC21.71■■□□□ 1.07
Dnajc28Q8VCE1 Gm43060-201ENSMUST00000200621 289 ntBASIC21.71■■□□□ 1.07
Dnajc28Q8VCE1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.71■■□□□ 1.07
Dnajc28Q8VCE1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Dnajc28Q8VCE1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Dnajc28Q8VCE1 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.71■■□□□ 1.07
Dnajc28Q8VCE1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Dnajc28Q8VCE1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Dnajc28Q8VCE1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
Dnajc28Q8VCE1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dnajc28Q8VCE1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.7■■□□□ 1.06
Dnajc28Q8VCE1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dnajc28Q8VCE1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Dnajc28Q8VCE1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dnajc28Q8VCE1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.7■■□□□ 1.06
Dnajc28Q8VCE1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Dnajc28Q8VCE1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Dnajc28Q8VCE1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dnajc28Q8VCE1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dnajc28Q8VCE1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Dnajc28Q8VCE1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dnajc28Q8VCE1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dnajc28Q8VCE1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Dnajc28Q8VCE1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dnajc28Q8VCE1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dnajc28Q8VCE1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms