Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndc1Q8VCB1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndc1Q8VCB1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.84■□□□□ 0.61
Ndc1Q8VCB1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ndc1Q8VCB1 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.84■□□□□ 0.61
Ndc1Q8VCB1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.84■□□□□ 0.61
Ndc1Q8VCB1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndc1Q8VCB1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndc1Q8VCB1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ndc1Q8VCB1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ndc1Q8VCB1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ndc1Q8VCB1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ndc1Q8VCB1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ndc1Q8VCB1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ndc1Q8VCB1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.83■□□□□ 0.6
Ndc1Q8VCB1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ndc1Q8VCB1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ndc1Q8VCB1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.83■□□□□ 0.6
Ndc1Q8VCB1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Gm12251-201ENSMUST00000117893 792 ntBASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ndc1Q8VCB1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Notumos-201ENSMUST00000151998 2659 ntBASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndc1Q8VCB1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
Ndc1Q8VCB1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndc1Q8VCB1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndc1Q8VCB1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.8■□□□□ 0.6
Ndc1Q8VCB1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ndc1Q8VCB1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndc1Q8VCB1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ndc1Q8VCB1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ndc1Q8VCB1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Ndc1Q8VCB1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ndc1Q8VCB1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ndc1Q8VCB1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ndc1Q8VCB1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ndc1Q8VCB1 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.79■□□□□ 0.6
Ndc1Q8VCB1 Gm43173-201ENSMUST00000202246 593 ntBASIC18.79■□□□□ 0.6
Ndc1Q8VCB1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ndc1Q8VCB1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ndc1Q8VCB1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ndc1Q8VCB1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ndc1Q8VCB1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ndc1Q8VCB1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ndc1Q8VCB1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ndc1Q8VCB1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ndc1Q8VCB1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ndc1Q8VCB1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ndc1Q8VCB1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ndc1Q8VCB1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.77■□□□□ 0.6
Ndc1Q8VCB1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ndc1Q8VCB1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms