Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.23■□□□□ 0.67
Lsm1Q8VC85 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm1Q8VC85 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm1Q8VC85 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Lsm1Q8VC85 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm1Q8VC85 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm1Q8VC85 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm1Q8VC85 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.22■□□□□ 0.67
Lsm1Q8VC85 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm1Q8VC85 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm1Q8VC85 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.22■□□□□ 0.67
Lsm1Q8VC85 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.22■□□□□ 0.67
Lsm1Q8VC85 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.22■□□□□ 0.67
Lsm1Q8VC85 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm1Q8VC85 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm1Q8VC85 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm1Q8VC85 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.21■□□□□ 0.67
Lsm1Q8VC85 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm1Q8VC85 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lsm1Q8VC85 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm1Q8VC85 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm1Q8VC85 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm1Q8VC85 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm1Q8VC85 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm1Q8VC85 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm1Q8VC85 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lsm1Q8VC85 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.2■□□□□ 0.66
Lsm1Q8VC85 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm1Q8VC85 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm1Q8VC85 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm1Q8VC85 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm1Q8VC85 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm1Q8VC85 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm1Q8VC85 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm1Q8VC85 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm1Q8VC85 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Lsm1Q8VC85 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.19■□□□□ 0.66
Lsm1Q8VC85 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm1Q8VC85 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm1Q8VC85 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm1Q8VC85 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm1Q8VC85 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm1Q8VC85 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.18■□□□□ 0.66
Lsm1Q8VC85 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm1Q8VC85 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.18■□□□□ 0.66
Lsm1Q8VC85 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm1Q8VC85 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm1Q8VC85 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Lsm1Q8VC85 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm1Q8VC85 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm1Q8VC85 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm1Q8VC85 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Lsm1Q8VC85 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm1Q8VC85 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm1Q8VC85 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm1Q8VC85 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm1Q8VC85 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.15■□□□□ 0.66
Lsm1Q8VC85 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lsm1Q8VC85 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lsm1Q8VC85 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm1Q8VC85 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.15■□□□□ 0.66
Lsm1Q8VC85 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.15■□□□□ 0.66
Lsm1Q8VC85 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm1Q8VC85 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsm1Q8VC85 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsm1Q8VC85 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsm1Q8VC85 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Lsm1Q8VC85 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm1Q8VC85 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm1Q8VC85 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm1Q8VC85 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm1Q8VC85 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.14■□□□□ 0.65
Lsm1Q8VC85 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.14■□□□□ 0.65
Lsm1Q8VC85 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm1Q8VC85 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Lsm1Q8VC85 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm1Q8VC85 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm1Q8VC85 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Lsm1Q8VC85 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm1Q8VC85 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm1Q8VC85 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.13■□□□□ 0.65
Lsm1Q8VC85 Iqck-206ENSMUST00000208658 2891 ntBASIC19.13■□□□□ 0.65
Lsm1Q8VC85 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm1Q8VC85 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm1Q8VC85 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm1Q8VC85 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm1Q8VC85 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm1Q8VC85 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms