Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 Gm21956-201ENSMUST00000179946 522 ntBASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 Gm21156-201ENSMUST00000189693 869 ntBASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.25■■□□□ 1.15
Cacnb1Q8R3Z5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cacnb1Q8R3Z5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Cacnb1Q8R3Z5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cacnb1Q8R3Z5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.25■■□□□ 1.15
Cacnb1Q8R3Z5 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.25■■□□□ 1.15
Cacnb1Q8R3Z5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cacnb1Q8R3Z5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cacnb1Q8R3Z5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacnb1Q8R3Z5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacnb1Q8R3Z5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.24■■□□□ 1.15
Cacnb1Q8R3Z5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacnb1Q8R3Z5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacnb1Q8R3Z5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacnb1Q8R3Z5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.24■■□□□ 1.15
Cacnb1Q8R3Z5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cacnb1Q8R3Z5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacnb1Q8R3Z5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacnb1Q8R3Z5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cacnb1Q8R3Z5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cacnb1Q8R3Z5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Cacnb1Q8R3Z5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cacnb1Q8R3Z5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Cacnb1Q8R3Z5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cacnb1Q8R3Z5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.22■■□□□ 1.15
Cacnb1Q8R3Z5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cacnb1Q8R3Z5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cacnb1Q8R3Z5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cacnb1Q8R3Z5 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC22.22■■□□□ 1.15
Cacnb1Q8R3Z5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cacnb1Q8R3Z5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cacnb1Q8R3Z5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cacnb1Q8R3Z5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.22■■□□□ 1.15
Cacnb1Q8R3Z5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.21■■□□□ 1.15
Cacnb1Q8R3Z5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.21■■□□□ 1.15
Cacnb1Q8R3Z5 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC22.21■■□□□ 1.15
Cacnb1Q8R3Z5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cacnb1Q8R3Z5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cacnb1Q8R3Z5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cacnb1Q8R3Z5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cacnb1Q8R3Z5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cacnb1Q8R3Z5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Cacnb1Q8R3Z5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cacnb1Q8R3Z5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Cacnb1Q8R3Z5 Gm29994-201ENSMUST00000195495 1193 ntBASIC22.2■■□□□ 1.14
Cacnb1Q8R3Z5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.2■■□□□ 1.14
Cacnb1Q8R3Z5 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.2■■□□□ 1.14
Cacnb1Q8R3Z5 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Cacnb1Q8R3Z5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cacnb1Q8R3Z5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cacnb1Q8R3Z5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacnb1Q8R3Z5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.19■■□□□ 1.14
Cacnb1Q8R3Z5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacnb1Q8R3Z5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC22.19■■□□□ 1.14
Cacnb1Q8R3Z5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacnb1Q8R3Z5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacnb1Q8R3Z5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacnb1Q8R3Z5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacnb1Q8R3Z5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacnb1Q8R3Z5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacnb1Q8R3Z5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cacnb1Q8R3Z5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cacnb1Q8R3Z5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cacnb1Q8R3Z5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cacnb1Q8R3Z5 Gm8770-201ENSMUST00000121113 1109 ntBASIC22.18■■□□□ 1.14
Cacnb1Q8R3Z5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cacnb1Q8R3Z5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.18■■□□□ 1.14
Cacnb1Q8R3Z5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Cacnb1Q8R3Z5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cacnb1Q8R3Z5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cacnb1Q8R3Z5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cacnb1Q8R3Z5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cacnb1Q8R3Z5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
Cacnb1Q8R3Z5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cacnb1Q8R3Z5 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC22.17■■□□□ 1.14
Cacnb1Q8R3Z5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cacnb1Q8R3Z5 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.17■■□□□ 1.14
Cacnb1Q8R3Z5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cacnb1Q8R3Z5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacnb1Q8R3Z5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacnb1Q8R3Z5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacnb1Q8R3Z5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacnb1Q8R3Z5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC22.16■■□□□ 1.14
Cacnb1Q8R3Z5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacnb1Q8R3Z5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacnb1Q8R3Z5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
Cacnb1Q8R3Z5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacnb1Q8R3Z5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms