Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup58Q8R332 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.39■■□□□ 1.01
Nup58Q8R332 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup58Q8R332 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup58Q8R332 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup58Q8R332 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup58Q8R332 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nup58Q8R332 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup58Q8R332 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup58Q8R332 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.38■■□□□ 1.01
Nup58Q8R332 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup58Q8R332 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nup58Q8R332 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup58Q8R332 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup58Q8R332 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Nup58Q8R332 Golph3-202ENSMUST00000226517 2359 ntBASIC21.37■■□□□ 1.01
Nup58Q8R332 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nup58Q8R332 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
Nup58Q8R332 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nup58Q8R332 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Nup58Q8R332 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.36■■□□□ 1.01
Nup58Q8R332 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Nup58Q8R332 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nup58Q8R332 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nup58Q8R332 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Nup58Q8R332 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Nup58Q8R332 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nup58Q8R332 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nup58Q8R332 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.35■■□□□ 1.01
Nup58Q8R332 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nup58Q8R332 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nup58Q8R332 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup58Q8R332 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup58Q8R332 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup58Q8R332 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup58Q8R332 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup58Q8R332 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.34■■□□□ 1.01
Nup58Q8R332 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.34■■□□□ 1.01
Nup58Q8R332 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.34■■□□□ 1.01
Nup58Q8R332 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup58Q8R332 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Nup58Q8R332 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup58Q8R332 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup58Q8R332 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Nup58Q8R332 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nup58Q8R332 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nup58Q8R332 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.33■■□□□ 1
Nup58Q8R332 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.33■■□□□ 1
Nup58Q8R332 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nup58Q8R332 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.33■■□□□ 1
Nup58Q8R332 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nup58Q8R332 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nup58Q8R332 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Nup58Q8R332 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nup58Q8R332 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.32■■□□□ 1
Nup58Q8R332 Gm7417-201ENSMUST00000192950 473 ntBASIC21.32■■□□□ 1
Nup58Q8R332 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.32■■□□□ 1
Nup58Q8R332 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.32■■□□□ 1
Nup58Q8R332 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Nup58Q8R332 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nup58Q8R332 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nup58Q8R332 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nup58Q8R332 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nup58Q8R332 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Nup58Q8R332 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nup58Q8R332 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nup58Q8R332 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.31■■□□□ 1
Nup58Q8R332 Gm10399-202ENSMUST00000202768 748 ntBASIC21.31■■□□□ 1
Nup58Q8R332 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Nup58Q8R332 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Nup58Q8R332 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Nup58Q8R332 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.31■■□□□ 1
Nup58Q8R332 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nup58Q8R332 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nup58Q8R332 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup58Q8R332 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup58Q8R332 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nup58Q8R332 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.3■■□□□ 1
Nup58Q8R332 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nup58Q8R332 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Nup58Q8R332 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup58Q8R332 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.3■■□□□ 1
Nup58Q8R332 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Nup58Q8R332 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Nup58Q8R332 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.3■■□□□ 1
Nup58Q8R332 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.3■■□□□ 1
Nup58Q8R332 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.3■■□□□ 1
Nup58Q8R332 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup58Q8R332 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup58Q8R332 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Nup58Q8R332 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Nup58Q8R332 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Nup58Q8R332 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.29■■□□□ 1
Nup58Q8R332 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Nup58Q8R332 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nup58Q8R332 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nup58Q8R332 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nup58Q8R332 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Nup58Q8R332 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.29■■□□□ 1
Nup58Q8R332 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms