Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r28Q8R2C9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r28Q8R2C9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r28Q8R2C9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Vmn1r28Q8R2C9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r28Q8R2C9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r28Q8R2C9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r28Q8R2C9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r28Q8R2C9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r28Q8R2C9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vmn1r28Q8R2C9 Gm45417-201ENSMUST00000209533 758 ntBASIC18.36■□□□□ 0.53
Vmn1r28Q8R2C9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r28Q8R2C9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vmn1r28Q8R2C9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Vmn1r28Q8R2C9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r28Q8R2C9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Vmn1r28Q8R2C9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Vmn1r28Q8R2C9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vmn1r28Q8R2C9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vmn1r28Q8R2C9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vmn1r28Q8R2C9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vmn1r28Q8R2C9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.35■□□□□ 0.53
Vmn1r28Q8R2C9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.35■□□□□ 0.53
Vmn1r28Q8R2C9 Mir6236-201ENSMUST00000184437 123 ntBASIC18.35■□□□□ 0.53
Vmn1r28Q8R2C9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.35■□□□□ 0.53
Vmn1r28Q8R2C9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vmn1r28Q8R2C9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Vmn1r28Q8R2C9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vmn1r28Q8R2C9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r28Q8R2C9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r28Q8R2C9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Vmn1r28Q8R2C9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r28Q8R2C9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r28Q8R2C9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vmn1r28Q8R2C9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Vmn1r28Q8R2C9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r28Q8R2C9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vmn1r28Q8R2C9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vmn1r28Q8R2C9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vmn1r28Q8R2C9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Vmn1r28Q8R2C9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vmn1r28Q8R2C9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vmn1r28Q8R2C9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vmn1r28Q8R2C9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.33■□□□□ 0.52
Vmn1r28Q8R2C9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vmn1r28Q8R2C9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vmn1r28Q8R2C9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vmn1r28Q8R2C9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r28Q8R2C9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r28Q8R2C9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r28Q8R2C9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r28Q8R2C9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r28Q8R2C9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Vmn1r28Q8R2C9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r28Q8R2C9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Vmn1r28Q8R2C9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r28Q8R2C9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Vmn1r28Q8R2C9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r28Q8R2C9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r28Q8R2C9 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.31■□□□□ 0.52
Vmn1r28Q8R2C9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r28Q8R2C9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r28Q8R2C9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms