Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cgref1Q8R1U2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cgref1Q8R1U2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cgref1Q8R1U2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cgref1Q8R1U2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cgref1Q8R1U2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cgref1Q8R1U2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cgref1Q8R1U2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cgref1Q8R1U2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
Cgref1Q8R1U2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cgref1Q8R1U2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cgref1Q8R1U2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.21■□□□□ 0.83
Cgref1Q8R1U2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cgref1Q8R1U2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cgref1Q8R1U2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cgref1Q8R1U2 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.21■□□□□ 0.83
Cgref1Q8R1U2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cgref1Q8R1U2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cgref1Q8R1U2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cgref1Q8R1U2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Cgref1Q8R1U2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.2■□□□□ 0.82
Cgref1Q8R1U2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cgref1Q8R1U2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cgref1Q8R1U2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cgref1Q8R1U2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cgref1Q8R1U2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.2■□□□□ 0.82
Cgref1Q8R1U2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cgref1Q8R1U2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cgref1Q8R1U2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.2■□□□□ 0.82
Cgref1Q8R1U2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cgref1Q8R1U2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cgref1Q8R1U2 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.17■□□□□ 0.82
Cgref1Q8R1U2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cgref1Q8R1U2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cgref1Q8R1U2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cgref1Q8R1U2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cgref1Q8R1U2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cgref1Q8R1U2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cgref1Q8R1U2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cgref1Q8R1U2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.17■□□□□ 0.82
Cgref1Q8R1U2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cgref1Q8R1U2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cgref1Q8R1U2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cgref1Q8R1U2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cgref1Q8R1U2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cgref1Q8R1U2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cgref1Q8R1U2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cgref1Q8R1U2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms