Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alms1Q8K4E0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.73■□□□□ 0.75
Alms1Q8K4E0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alms1Q8K4E0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.73■□□□□ 0.75
Alms1Q8K4E0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alms1Q8K4E0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Alms1Q8K4E0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alms1Q8K4E0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.73■□□□□ 0.75
Alms1Q8K4E0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.73■□□□□ 0.75
Alms1Q8K4E0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alms1Q8K4E0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alms1Q8K4E0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alms1Q8K4E0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.72■□□□□ 0.75
Alms1Q8K4E0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.72■□□□□ 0.75
Alms1Q8K4E0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Alms1Q8K4E0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.72■□□□□ 0.75
Alms1Q8K4E0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alms1Q8K4E0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Alms1Q8K4E0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alms1Q8K4E0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alms1Q8K4E0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Alms1Q8K4E0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Alms1Q8K4E0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alms1Q8K4E0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alms1Q8K4E0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Alms1Q8K4E0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Alms1Q8K4E0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Alms1Q8K4E0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alms1Q8K4E0 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.71■□□□□ 0.75
Alms1Q8K4E0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alms1Q8K4E0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alms1Q8K4E0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alms1Q8K4E0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alms1Q8K4E0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.7■□□□□ 0.74
Alms1Q8K4E0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Alms1Q8K4E0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Alms1Q8K4E0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alms1Q8K4E0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.7■□□□□ 0.74
Alms1Q8K4E0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alms1Q8K4E0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.7■□□□□ 0.74
Alms1Q8K4E0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Alms1Q8K4E0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alms1Q8K4E0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alms1Q8K4E0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alms1Q8K4E0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alms1Q8K4E0 Gm18671-201ENSMUST00000214826 683 ntBASIC19.69■□□□□ 0.74
Alms1Q8K4E0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alms1Q8K4E0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.69■□□□□ 0.74
Alms1Q8K4E0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alms1Q8K4E0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Alms1Q8K4E0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alms1Q8K4E0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alms1Q8K4E0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Alms1Q8K4E0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alms1Q8K4E0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Alms1Q8K4E0 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.68■□□□□ 0.74
Alms1Q8K4E0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alms1Q8K4E0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Alms1Q8K4E0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alms1Q8K4E0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alms1Q8K4E0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Alms1Q8K4E0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alms1Q8K4E0 Nespas-201ENSMUST00000143738 1083 ntBASIC19.67■□□□□ 0.74
Alms1Q8K4E0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Alms1Q8K4E0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alms1Q8K4E0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alms1Q8K4E0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.67■□□□□ 0.74
Alms1Q8K4E0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Alms1Q8K4E0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Alms1Q8K4E0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Alms1Q8K4E0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alms1Q8K4E0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alms1Q8K4E0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Alms1Q8K4E0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alms1Q8K4E0 Gm10252-201ENSMUST00000209541 832 ntBASIC19.66■□□□□ 0.74
Alms1Q8K4E0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alms1Q8K4E0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alms1Q8K4E0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alms1Q8K4E0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alms1Q8K4E0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alms1Q8K4E0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.65■□□□□ 0.74
Alms1Q8K4E0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alms1Q8K4E0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alms1Q8K4E0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Alms1Q8K4E0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alms1Q8K4E0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.64■□□□□ 0.74
Alms1Q8K4E0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Alms1Q8K4E0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Alms1Q8K4E0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Alms1Q8K4E0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Alms1Q8K4E0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Alms1Q8K4E0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Alms1Q8K4E0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Alms1Q8K4E0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.64■□□□□ 0.73
Alms1Q8K4E0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Alms1Q8K4E0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alms1Q8K4E0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.63■□□□□ 0.73
Alms1Q8K4E0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Alms1Q8K4E0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alms1Q8K4E0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms